RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 GYG1P46976 350 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 NMIQ13287 307 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 C2CD5Q86YS7 1000 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 WDR33Q9C0J8 1336 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 FAM227BQ96M60 508 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 TCHHQ07283 1943 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 XDHP47989 1333 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PDIA4P13667 645 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 KLRK1P26718 216 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 GPSM2P81274 684 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 CAVIN4Q5BKX8 364 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.451e-10■■□□□ 12.5
CDK5RAP3-236ENST00000584991 FAM84BQ96KN1 310 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
CDK5RAP3-236ENST00000584991 RFX7Q2KHR2 1363 aa17.83■□□□□ 0.45
CDK5RAP3-236ENST00000584991 MYO5AQ9Y4I1 1855 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 H0YIN7 160 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 CHGBP05060 677 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 RASGRF1Q13972 1273 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LRSAM1Q6UWE0 723 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 KIAA1211Q6ZU35 1233 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 NSFL1CQ9UNZ2 370 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LEMD3Q9Y2U8 911 aa17.83■□□□□ 0.44
CDK5RAP3-236ENST00000584991 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 NCLP19338 710 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TMC4Q7Z404 712 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 VPS37DQ86XT2 251 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MYH7P12883 1935 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 CHRNA5P30532 468 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZSCAN30Q86W11 494 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 PDLIM2Q96JY6 352 aa17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 GNL3LQ9NVN8 582 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-236ENST00000584991 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TXNRD3Q86VQ6 643 aa17.81■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 STYK1Q6J9G0 422 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 RNF113AO15541 343 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MYH13Q9UKX3 1938 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 C10orf71Q711Q0 1435 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 UFL1O94874 794 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 KCNB2Q92953 911 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 TTC14Q96N46 770 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 GPR101Q96P66 508 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ATP6V1DQ9Y5K8 247 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MCM5P33992 734 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MCMDC2Q4G0Z9 681 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZMYM1Q5SVZ6 1142 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 POLLQ9UGP5 575 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 SNX14Q9Y5W7 946 aa17.78■□□□□ 0.44
CDK5RAP3-236ENST00000584991 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-236ENST00000584991 MED23Q9ULK4 1368 aa17.77■□□□□ 0.44
CDK5RAP3-236ENST00000584991 PTH1RQ03431 593 aa17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TBC1D16Q8TBP0 767 aa17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CNKSR1Q969H4 720 aa17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.431e-7■■■□□ 14.8
CDK5RAP3-236ENST00000584991 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.43
CDK5RAP3-236ENST00000584991 C6orf229H3BNL8 230 aa17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 LETM1O95202 739 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms