RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
CSNK1D-224ENST00000584672 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
CSNK1D-224ENST00000584672 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
CSNK1D-224ENST00000584672 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
CSNK1D-224ENST00000584672 SNAP23O00161 211 aa18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 KCNJ4P48050 445 aa18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 JAG2Q9Y219 1238 aa18.24■□□□□ 0.51
CSNK1D-224ENST00000584672 IGKV5-2P06315 115 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 MMP14P50281 582 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 TAF1CQ15572 869 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 SUPT20HL1Q3ZLR7 823 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 OPTNQ96CV9 577 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
CSNK1D-224ENST00000584672 DLL1O00548 723 aa18.22■□□□□ 0.51
CSNK1D-224ENST00000584672 CWF19L2Q2TBE0 894 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-224ENST00000584672 ANKRD13AQ8IZ07 590 aa18.22■□□□□ 0.51
CSNK1D-224ENST00000584672 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-224ENST00000584672 CD209Q9NNX6 404 aa18.22■□□□□ 0.51
CSNK1D-224ENST00000584672 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 MYO1BO43795 1136 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 DDX58O95786 925 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 RASA3Q14644 834 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 BRI3BPQ8WY22 251 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 ARHGAP39Q9C0H5 1083 aa18.21■□□□□ 0.51
CSNK1D-224ENST00000584672 CCL15-CCL14A0A0B4J2E2 113 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 ITGA6P23229 1130 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 CCL15Q16663 113 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 CDAN1Q8IWY9 1227 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 MS4A4AQ96JQ5 239 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
CSNK1D-224ENST00000584672 TAF5LO75529 589 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 CHRNDQ07001 517 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 DPF3Q92784 378 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
CSNK1D-224ENST00000584672 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 UNCXA6NJT0 531 aa18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 ARHGEF6Q15052 776 aa18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
CSNK1D-224ENST00000584672 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 MTFR1Q15390 333 aa18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 SHISA4Q96DD7 197 aa18.16■□□□□ 0.5
CSNK1D-224ENST00000584672 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 VGLL4Q14135 290 aa18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 RANBP2P49792 3224 aaKnown RBP18.15■□□□□ 0.5
CSNK1D-224ENST00000584672 GTF2A2P52657 109 aa18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 RALBP1Q15311 655 aa18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 ZNF804AQ7Z570 1209 aa18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 TDRD3Q9H7E2 651 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 ZNF70Q9UC06 446 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-224ENST00000584672 ARAP2Q8WZ64 1704 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 H7C1W4 665 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 GNAI1P63096 354 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 LACTBP83111 547 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 KIF22Q14807 665 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 TSPYL6Q8N831 410 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 TMEM39BQ9GZU3 492 aa18.13■□□□□ 0.49
CSNK1D-224ENST00000584672 SPDYE2Q495Y8 402 aa18.12■□□□□ 0.49
CSNK1D-224ENST00000584672 G2E3Q7L622 706 aa18.12■□□□□ 0.49
CSNK1D-224ENST00000584672 PLIN1O60240 522 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 IL1R1P14778 569 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 TEPSINQ96N21 525 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 CSADQ9Y600 493 aa18.11■□□□□ 0.49
CSNK1D-224ENST00000584672 TLR2O60603 784 aa18.1■□□□□ 0.49
CSNK1D-224ENST00000584672 WDHD1O75717 1129 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-224ENST00000584672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.1■□□□□ 0.499e-9■■□□□ 12
CSNK1D-224ENST00000584672 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
CSNK1D-224ENST00000584672 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 ANKRD18BA2A2Z9 1011 aa18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 BTBD19C9JJ37 291 aa18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 CTGFP29279 349 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms