RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 PSMC4P43686 418 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 COPS6Q7L5N1 327 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 NECAB2Q7Z6G3 386 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 FAM43AQ8N2R8 423 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 FBXW7Q969H0 707 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 THUMPD2Q9BTF0 503 aaKnown RBP8.36□□□□□ -1.07
NUP85-221ENST00000583548 UBE2OQ9C0C9 1292 aaKnown RBP8.36□□□□□ -1.07
NUP85-221ENST00000583548 COA1Q9GZY4 146 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
NUP85-221ENST00000583548 POTEB2H3BUK9 544 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
NUP85-221ENST00000583548 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
NUP85-221ENST00000583548 OSBPP22059 807 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 TNFAIP1Q13829 316 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 PDIA6Q15084 440 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 CCDC152Q4G0S7 254 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 FAM89AQ96GI7 184 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 GUCD1Q96NT3 240 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 CSADQ9Y600 493 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 UNC80Q8N2C7 3258 aa8.35□□□□□ -1.07
NUP85-221ENST00000583548 ADGRA2Q96PE1 1338 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 EIF2S2P20042 333 aaKnown RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 MAGEA10P43363 369 aaPredicted RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 AIMP1Q12904 312 aaKnown RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 NBPF12Q5TAG4 269 aaPredicted RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 TTLL5Q6EMB2 1281 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 C7orf61Q8IZ16 206 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 MAFAQ8NHW3 353 aaPredicted RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 XAGE3Q8WTP9 111 aa8.34□□□□□ -1.07
NUP85-221ENST00000583548 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
NUP85-221ENST00000583548 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
NUP85-221ENST00000583548 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.08
NUP85-221ENST00000583548 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 CC2D1BQ5T0F9 858 aaKnown RBP8.33□□□□□ -1.08
NUP85-221ENST00000583548 C17orf99Q6UX52 265 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 PLBD2Q8NHP8 589 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 MXD3Q9BW11 206 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
NUP85-221ENST00000583548 ZMYND8Q9ULU4 1186 aaPredicted RBP8.33□□□□□ -1.08
NUP85-221ENST00000583548 TMEM265A0A087WTH1 108 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 FCGRTP55899 365 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 MAP3K9P80192 1104 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
NUP85-221ENST00000583548 MAPK8IP2Q13387 824 aaPredicted RBP8.32□□□□□ -1.08
NUP85-221ENST00000583548 VGLL4Q14135 290 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 RASA3Q14644 834 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
NUP85-221ENST00000583548 PXYLP1Q8TE99 480 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 DEFB118Q96PH6 123 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
NUP85-221ENST00000583548 ISCA1Q9BUE6 129 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 CRISPLD2Q9H0B8 497 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 VEZTQ9HBM0 779 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 SEC31BQ9NQW1 1179 aa8.32□□□□□ -1.08
NUP85-221ENST00000583548 ARIH1Q9Y4X5 557 aaPredicted RBP8.32□□□□□ -1.08
NUP85-221ENST00000583548 LAMA3Q16787 3333 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 COL4A1P02462 1669 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 BTBD19C9JJ37 291 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 ADCY3O60266 1144 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 ANXA1P04083 346 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 CCT4P50991 539 aaKnown RBP8.31□□□□□ -1.08
NUP85-221ENST00000583548 PRKCZQ05513 592 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 PROSER3Q2NL68 480 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 ERO1BQ86YB8 467 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 ZBTB38Q8NAP3 1195 aaPredicted RBP8.31□□□□□ -1.08
NUP85-221ENST00000583548 NBPF3Q9H094 633 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 PAK6Q9NQU5 681 aaPredicted RBP8.31□□□□□ -1.08
NUP85-221ENST00000583548 TSPYL4Q9UJ04 414 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
NUP85-221ENST00000583548 SYNGAP1Q96PV0 1343 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 CLRN2A0PK11 232 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 PDE8AO60658 829 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 INHAP05111 366 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 HSPA5P11021 654 aaKnown RBP8.3□□□□□ -1.08
NUP85-221ENST00000583548 SYN1P17600 705 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 TNNI2P48788 182 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 GTF2IP78347 998 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 MAP3K12Q12852 859 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
NUP85-221ENST00000583548 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
NUP85-221ENST00000583548 CNKSR2Q8WXI2 1034 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 HOOK2Q96ED9 719 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 FAM161BQ96MY7 647 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
NUP85-221ENST00000583548 BABAM1Q9NWV8 329 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 CPA4Q9UI42 421 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 ZSWIM8A7E2V4 1837 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 ECM29Q5VYK3 1845 aa8.3□□□□□ -1.08
NUP85-221ENST00000583548 COL2A1P02458 1487 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms