RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
CCDC57-213ENST00000581625 MYH13Q9UKX3 1938 aa19.57■□□□□ 0.72
CCDC57-213ENST00000581625 DDNO94850 711 aaPredicted RBP19.56■□□□□ 0.72
CCDC57-213ENST00000581625 TTC39AQ5SRH9 613 aa19.56■□□□□ 0.72
CCDC57-213ENST00000581625 DACT2Q5SW24 774 aa19.56■□□□□ 0.72
CCDC57-213ENST00000581625 RSBN1LQ6PCB5 846 aaPredicted RBP19.56■□□□□ 0.72
CCDC57-213ENST00000581625 AGBL3Q8NEM8 1001 aa19.56■□□□□ 0.72
CCDC57-213ENST00000581625 TBC1D22AQ8WUA7 517 aa19.56■□□□□ 0.72
CCDC57-213ENST00000581625 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
CCDC57-213ENST00000581625 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
CCDC57-213ENST00000581625 SMARCA5O60264 1052 aaPredicted RBP19.55■□□□□ 0.72
CCDC57-213ENST00000581625 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
CCDC57-213ENST00000581625 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
CCDC57-213ENST00000581625 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 WDR66Q8TBY9 1149 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 DPF2Q92785 391 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 GPATCH3Q96I76 525 aa19.54■□□□□ 0.72
CCDC57-213ENST00000581625 LMOD1P29536 600 aaPredicted RBP19.53■□□□□ 0.72
CCDC57-213ENST00000581625 GMPSP49915 693 aaPredicted RBP19.53■□□□□ 0.72
CCDC57-213ENST00000581625 MMP14P50281 582 aa19.53■□□□□ 0.72
CCDC57-213ENST00000581625 SCN4AP35499 1836 aa19.53■□□□□ 0.72
CCDC57-213ENST00000581625 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 SCNN1DP51172 638 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 NUCB1Q02818 461 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 CHAF1AQ13111 956 aaPredicted RBP19.52■□□□□ 0.72
CCDC57-213ENST00000581625 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 ZGPATQ8N5A5 531 aaKnown RBP19.52■□□□□ 0.72
CCDC57-213ENST00000581625 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
CCDC57-213ENST00000581625 GPRC5DQ9NZD1 345 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 SUGT1Q9Y2Z0 365 aa19.52■□□□□ 0.72
CCDC57-213ENST00000581625 CENPQQ7L2Z9 268 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-213ENST00000581625 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
CCDC57-213ENST00000581625 SPATA5Q8NB90 893 aa19.51■□□□□ 0.71
CCDC57-213ENST00000581625 ZNF526Q8TF50 670 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-213ENST00000581625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC57-213ENST00000581625 CCDC136Q96JN2 1154 aa19.51■□□□□ 0.71
CCDC57-213ENST00000581625 GMLQ99445 158 aa19.51■□□□□ 0.71
CCDC57-213ENST00000581625 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
CCDC57-213ENST00000581625 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
CCDC57-213ENST00000581625 MCAMP43121 646 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 ECHDC1Q9NTX5 307 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 HACL1Q9UJ83 578 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 JAG2Q9Y219 1238 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 MAST3O60307 1309 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 TTC41PQ6P2S7 1318 aa19.5■□□□□ 0.71
CCDC57-213ENST00000581625 VEGFAP15692 232 aaPredicted RBP19.49■□□□□ 0.71
CCDC57-213ENST00000581625 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
CCDC57-213ENST00000581625 OGFOD1Q8N543 542 aa19.49■□□□□ 0.71
CCDC57-213ENST00000581625 CERS5Q8N5B7 392 aa19.49■□□□□ 0.71
CCDC57-213ENST00000581625 H7C1D1 291 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 IGSF3O75054 1194 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 ATP5JP18859 108 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 SCARF1Q14162 830 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 MICALL2Q8IY33 904 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
CCDC57-213ENST00000581625 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 SALL3Q9BXA9 1300 aa19.48■□□□□ 0.71
CCDC57-213ENST00000581625 ERC2O15083 957 aa19.47■□□□□ 0.71
CCDC57-213ENST00000581625 MX1P20591 662 aa19.47■□□□□ 0.71
CCDC57-213ENST00000581625 ZNF280AP59817 542 aaPredicted RBP19.47■□□□□ 0.71
CCDC57-213ENST00000581625 SPTY2D1Q68D10 685 aaPredicted RBP19.47■□□□□ 0.71
CCDC57-213ENST00000581625 KIAA0825Q8IV33 1275 aa19.47■□□□□ 0.71
CCDC57-213ENST00000581625 MXD3Q9BW11 206 aa19.47■□□□□ 0.71
CCDC57-213ENST00000581625 NMRK2Q9NPI5 230 aa19.47■□□□□ 0.71
CCDC57-213ENST00000581625 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
CCDC57-213ENST00000581625 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
CCDC57-213ENST00000581625 POTECB2RU33 542 aa19.46■□□□□ 0.71
CCDC57-213ENST00000581625 EPHX2P34913 555 aa19.46■□□□□ 0.71
CCDC57-213ENST00000581625 PI16Q6UXB8 463 aa19.46■□□□□ 0.71
CCDC57-213ENST00000581625 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
CCDC57-213ENST00000581625 TAF1DQ9H5J8 278 aaPredicted RBP19.46■□□□□ 0.71
CCDC57-213ENST00000581625 AKAP11Q9UKA4 1901 aa19.46■□□□□ 0.71
CCDC57-213ENST00000581625 MAST2Q6P0Q8 1798 aa19.45■□□□□ 0.7
CCDC57-213ENST00000581625 LDHBP07195 334 aaKnown RBP19.45■□□□□ 0.7
CCDC57-213ENST00000581625 EPS15P42566 896 aa19.45■□□□□ 0.7
CCDC57-213ENST00000581625 ZAP70P43403 619 aa19.45■□□□□ 0.7
CCDC57-213ENST00000581625 TTF1Q15361 905 aaPredicted RBP19.45■□□□□ 0.7
CCDC57-213ENST00000581625 RRAGCQ9HB90 399 aa19.45■□□□□ 0.7
CCDC57-213ENST00000581625 AOX1Q06278 1338 aa19.45■□□□□ 0.7
CCDC57-213ENST00000581625 GLRX3O76003 335 aaKnown RBP19.44■□□□□ 0.7
CCDC57-213ENST00000581625 PRDX5P30044 214 aa19.44■□□□□ 0.7
CCDC57-213ENST00000581625 HDLBPQ00341 1268 aaKnown RBP19.44■□□□□ 0.7
CCDC57-213ENST00000581625 USP50Q70EL3 339 aaPredicted RBP19.44■□□□□ 0.7
CCDC57-213ENST00000581625 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
CCDC57-213ENST00000581625 HAUS7Q99871 368 aa19.44■□□□□ 0.7
CCDC57-213ENST00000581625 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
CCDC57-213ENST00000581625 ABCF2Q9UG63 623 aa19.44■□□□□ 0.7
CCDC57-213ENST00000581625 STAP2Q9UGK3 403 aa19.44■□□□□ 0.7
CCDC57-213ENST00000581625 TTF2Q9UNY4 1162 aaKnown RBP19.44■□□□□ 0.7
CCDC57-213ENST00000581625 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
CCDC57-213ENST00000581625 CYP2E1P05181 493 aaPredicted RBP19.43■□□□□ 0.7
CCDC57-213ENST00000581625 KIF4BQ2VIQ3 1234 aa19.43■□□□□ 0.7
CCDC57-213ENST00000581625 TMED8Q6PL24 325 aaPredicted RBP19.43■□□□□ 0.7
CCDC57-213ENST00000581625 ERICH6Q7L0X2 663 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms