RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 GRM2Q14416 872 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 C2orf27AQ580R0 203 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 KRT26Q7Z3Y9 468 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 NIFKQ9BYG3 293 aaKnown RBP10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 PLAAQ9Y263 795 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 HRH3Q9Y5N1 445 aa10.18□□□□□ -0.78
SUPT4H1-207ENST00000581540 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 HRO43593 1189 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 NYAP1Q6ZVC0 841 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 ANKRD24Q8TF21 1146 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 THAP3Q8WTV1 239 aaPredicted RBP10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 SHDQ96IW2 340 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 RHOVQ96L33 236 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 ACTR10Q9NZ32 417 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 EID1Q9Y6B2 187 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 ZNF142P52746 1687 aaPredicted RBP10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 ABCA6Q8N139 1617 aa10.17□□□□□ -0.78
SUPT4H1-207ENST00000581540 TOM1O60784 492 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 CBLBQ13191 982 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 SNAP47Q5SQN1 464 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 FBXL19Q6PCT2 694 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 NKD1Q969G9 470 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 MAPK8IP1Q9UQF2 711 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 PARP3Q9Y6F1 533 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 CDK13Q14004 1512 aaKnown RBP10.16□□□□□ -0.78
SUPT4H1-207ENST00000581540 KIF14Q15058 1648 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 F6X3S4 739 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 PLIN1O60240 522 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 CNGA1P29973 690 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 CLN3Q13286 438 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 GRIN2CQ14957 1233 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 RALBP1Q15311 655 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 IER5Q5VY09 327 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 POTEBQ6S5H4 581 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 SV2BQ7L1I2 683 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 CELF2-AS1Q8N7Q2 184 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 RPS6KC1Q96S38 1066 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 MTRQ99707 1265 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 ELP3Q9H9T3 547 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 BCS1LQ9Y276 419 aa10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 TCOF1Q13428 1488 aaKnown RBP10.15□□□□□ -0.78
SUPT4H1-207ENST00000581540 KIF3BO15066 747 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 GREM1O60565 184 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 TRIM37O94972 964 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 HSPA1LP34931 641 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 ARSDP51689 593 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 EIF6P56537 245 aaKnown RBP10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 SQSTM1Q13501 440 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 MTERF2Q49AM1 385 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 ZNF295-AS1Q8N0V1 137 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 OR6P1Q8NGX9 317 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 UBP1Q9NZI7 540 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
SUPT4H1-207ENST00000581540 CPS1P31327 1500 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 S1PR4O95977 384 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 TRIM32Q13049 653 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 FXNQ16595 210 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 TRIM56Q9BRZ2 755 aaKnown RBP10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 FHDC1Q9C0D6 1143 aaPredicted RBP10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 LEMD3Q9Y2U8 911 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 GPC6Q9Y625 555 aaPredicted RBP10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
SUPT4H1-207ENST00000581540 MYO3AQ8NEV4 1616 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 KIDINS220Q9ULH0 1771 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 ADD1P35611 737 aaKnown RBP10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 GRM5P41594 1212 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 IDH3AP50213 366 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 CENPCQ03188 943 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 NR5A1Q13285 461 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 CCDC81Q6ZN84 652 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 MPNDQ8N594 471 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 PHC3Q8NDX5 983 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 EHD4Q9H223 541 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 CLIP1P30622 1438 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 CEP170BQ9Y4F5 1589 aaPredicted RBP10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 ROBO2Q9HCK4 1378 aa10.12□□□□□ -0.79
SUPT4H1-207ENST00000581540 TROQ12816 1431 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms