RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SCARF1Q14162 830 aa23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 MVPQ14764 893 aaKnown RBP23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 ATP2B3Q16720 1220 aa23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 CAVIN4Q5BKX8 364 aa23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 VPS37DQ86XT2 251 aa23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 FAM205AQ6ZU69 1335 aa23.18■■□□□ 1.3
PPP4R1-215ENST00000580182 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
PPP4R1-215ENST00000580182 POLA2Q14181 598 aa23.18■■□□□ 1.3
PPP4R1-215ENST00000580182 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
PPP4R1-215ENST00000580182 TFCP2Q12800 502 aa23.17■■□□□ 1.3
PPP4R1-215ENST00000580182 OGFOD1Q8N543 542 aa23.17■■□□□ 1.3
PPP4R1-215ENST00000580182 CREBZFQ9NS37 354 aa23.17■■□□□ 1.3
PPP4R1-215ENST00000580182 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
PPP4R1-215ENST00000580182 TMEM88BA6NKF7 163 aa23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 CHAF1AQ13111 956 aaPredicted RBP23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 NBPF9Q3BBW0 867 aa23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 CDC37L1Q7L3B6 337 aa23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 SSH3Q8TE77 659 aa23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 POLR2AP24928 1970 aaKnown RBP23.16■■□□□ 1.3
PPP4R1-215ENST00000580182 ADM5C9JUS6 153 aa23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 ADORA1P30542 326 aa23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 TIMM10P62072 90 aa23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 FKBP1AP62942 108 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 ANGEL2Q5VTE6 544 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 CST9Q5W186 159 aa23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 DCPSQ96C86 337 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 SCAF8Q9UPN6 1271 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 PCDHAC2Q9Y5I4 1007 aa23.15■■□□□ 1.3
PPP4R1-215ENST00000580182 FRAT2O75474 233 aaPredicted RBP23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 G3BP1Q13283 466 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 GRIK5Q16478 980 aa23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 CEP85Q6P2H3 762 aa23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 KRT26Q7Z3Y9 468 aa23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 HDAC9Q9UKV0 1011 aa23.14■■□□□ 1.29
PPP4R1-215ENST00000580182 WNT10BO00744 389 aa23.13■■□□□ 1.29
PPP4R1-215ENST00000580182 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
PPP4R1-215ENST00000580182 KLRG1Q96E93 195 aa23.13■■□□□ 1.29
PPP4R1-215ENST00000580182 DDX19BQ9UMR2 479 aa23.13■■□□□ 1.29
PPP4R1-215ENST00000580182 ZNF408Q9H9D4 720 aa23.12■■□□□ 1.29
PPP4R1-215ENST00000580182 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
PPP4R1-215ENST00000580182 TRPM7Q96QT4 1865 aa23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 A0A1B0GUL7 405 aa23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 PHKA1P46020 1223 aa23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 PDE3AQ14432 1141 aa23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 ZBED3Q96IU2 234 aaPredicted RBP23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 ZBTB40Q9NUA8 1239 aa23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 COL1A1P02452 1464 aaPredicted RBP23.11■■□□□ 1.29
PPP4R1-215ENST00000580182 MMP14P50281 582 aa23.1■■□□□ 1.29
PPP4R1-215ENST00000580182 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
PPP4R1-215ENST00000580182 ARAP2Q8WZ64 1704 aa23.1■■□□□ 1.29
PPP4R1-215ENST00000580182 DLGAP5Q15398 846 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 CFAP100Q494V2 611 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 CCDC102BQ68D86 513 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 SULF1Q8IWU6 871 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 XAGE2Q96GT9 111 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 NEUROD6Q96NK8 337 aa23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
PPP4R1-215ENST00000580182 AOX1Q06278 1338 aa23.08■■□□□ 1.29
PPP4R1-215ENST00000580182 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.29
PPP4R1-215ENST00000580182 NOP58Q9Y2X3 529 aaKnown RBP23.08■■□□□ 1.29
PPP4R1-215ENST00000580182 MTMR14Q8NCE2 650 aa23.07■■□□□ 1.28
PPP4R1-215ENST00000580182 TBC1D22AQ8WUA7 517 aa23.07■■□□□ 1.28
PPP4R1-215ENST00000580182 PRMT6Q96LA8 375 aaPredicted RBP23.07■■□□□ 1.28
PPP4R1-215ENST00000580182 PITPNM2Q9BZ72 1349 aa23.07■■□□□ 1.28
PPP4R1-215ENST00000580182 MYH13Q9UKX3 1938 aa23.06■■□□□ 1.28
PPP4R1-215ENST00000580182 CNTNAP1P78357 1384 aa23.06■■□□□ 1.28
PPP4R1-215ENST00000580182 RBM5P52756 815 aaKnown RBP eCLIP23.06■■□□□ 1.28
PPP4R1-215ENST00000580182 SIRT2Q8IXJ6 389 aa23.06■■□□□ 1.28
PPP4R1-215ENST00000580182 CDCA5Q96FF9 252 aa23.06■■□□□ 1.28
PPP4R1-215ENST00000580182 SPDYE2BA6NHP3 402 aa23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 SPDYE6P0CI01 402 aa23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 PRAMEF18Q5VWM3 479 aa23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 GNL3LQ9NVN8 582 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 EXOC6BQ9Y2D4 811 aa23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 TLL2Q9Y6L7 1015 aa23.05■■□□□ 1.28
PPP4R1-215ENST00000580182 CLRN2A0PK11 232 aa23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 RASSF10A6NK89 507 aa23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 DEFB115Q30KQ5 88 aa23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 WDR66Q8TBY9 1149 aa23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 SERPINA10Q9UK55 444 aa23.04■■□□□ 1.28
PPP4R1-215ENST00000580182 CRKP46108 304 aa23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 VEGFBP49765 207 aa23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 TNNI3KQ59H18 835 aa23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 DENND2AQ9ULE3 1009 aa23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 FPGT-TNNI3KV9GXZ4 949 aa23.03■■□□□ 1.28
PPP4R1-215ENST00000580182 RASGRF1Q13972 1273 aa23.02■■□□□ 1.28
PPP4R1-215ENST00000580182 SAPCD2Q86UD0 394 aa23.02■■□□□ 1.28
PPP4R1-215ENST00000580182 JMYQ8N9B5 988 aa23.02■■□□□ 1.28
PPP4R1-215ENST00000580182 CHMP4BQ9H444 224 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-215ENST00000580182 SEMA3EO15041 775 aa23.01■■□□□ 1.27
PPP4R1-215ENST00000580182 GORABQ5T7V8 394 aa23.01■■□□□ 1.27
PPP4R1-215ENST00000580182 GPR108Q9NPR9 543 aa23.01■■□□□ 1.27
PPP4R1-215ENST00000580182 PRDX5P30044 214 aa23■■□□□ 1.27
PPP4R1-215ENST00000580182 APOBEC3FQ8IUX4 373 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms