RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
MKS1-207ENST00000578789 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
MKS1-207ENST00000578789 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
MKS1-207ENST00000578789 BCAMP50895 628 aa17.93■□□□□ 0.46
MKS1-207ENST00000578789 RBM26Q5T8P6 1007 aaKnown RBP17.93■□□□□ 0.46
MKS1-207ENST00000578789 CEP85Q6P2H3 762 aa17.93■□□□□ 0.46
MKS1-207ENST00000578789 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
MKS1-207ENST00000578789 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
MKS1-207ENST00000578789 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
MKS1-207ENST00000578789 ZBTB22O15209 634 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 HTRA3P83110 453 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 KIAA0825Q8IV33 1275 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 OGFOD1Q8N543 542 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 HDAC9Q9UKV0 1011 aa17.92■□□□□ 0.46
MKS1-207ENST00000578789 COL1A1P02452 1464 aaPredicted RBP17.91■□□□□ 0.46
MKS1-207ENST00000578789 TFCP2Q12800 502 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 CDC37L1Q7L3B6 337 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 GLIS2Q9BZE0 524 aaPredicted RBP17.91■□□□□ 0.46
MKS1-207ENST00000578789 CHMP4BQ9H444 224 aaKnown RBP17.91■□□□□ 0.46
MKS1-207ENST00000578789 GGA3Q9NZ52 723 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 JAG2Q9Y219 1238 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
MKS1-207ENST00000578789 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
MKS1-207ENST00000578789 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 TRAF5O00463 557 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
MKS1-207ENST00000578789 SCARF1Q14162 830 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 MFSD14BQ5SR56 506 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 DNAJC5GQ8N7S2 189 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 ZBED3Q96IU2 234 aaPredicted RBP17.9■□□□□ 0.46
MKS1-207ENST00000578789 IQSEC3Q9UPP2 1182 aaPredicted RBP17.9■□□□□ 0.46
MKS1-207ENST00000578789 AKAP2Q9Y2D5 859 aa17.9■□□□□ 0.46
MKS1-207ENST00000578789 ASTN2O75129 1339 aaPredicted RBP17.9■□□□□ 0.46
MKS1-207ENST00000578789 A0A1B0GUL7 405 aa17.89■□□□□ 0.45
MKS1-207ENST00000578789 MTMR14Q8NCE2 650 aa17.89■□□□□ 0.45
MKS1-207ENST00000578789 TBC1D22AQ8WUA7 517 aa17.89■□□□□ 0.45
MKS1-207ENST00000578789 DCPSQ96C86 337 aaKnown RBP17.89■□□□□ 0.45
MKS1-207ENST00000578789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.89■□□□□ 0.45
MKS1-207ENST00000578789 WNT10BO00744 389 aa17.88■□□□□ 0.45
MKS1-207ENST00000578789 ADORA1P30542 326 aa17.88■□□□□ 0.45
MKS1-207ENST00000578789 FMR1Q06787 632 aaKnown RBP eCLIP17.88■□□□□ 0.45
MKS1-207ENST00000578789 ANGEL2Q5VTE6 544 aaKnown RBP17.88■□□□□ 0.45
MKS1-207ENST00000578789 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
MKS1-207ENST00000578789 SEMA3EO15041 775 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 PHKA1P46020 1223 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 RRP1P56182 461 aaKnown RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 TIMM10P62072 90 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 CHAF1AQ13111 956 aaPredicted RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
MKS1-207ENST00000578789 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
MKS1-207ENST00000578789 ADM5C9JUS6 153 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 F8W031 263 aaPredicted RBP17.86■□□□□ 0.45
MKS1-207ENST00000578789 CST9Q5W186 159 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 SULF1Q8IWU6 871 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 SUGT1Q9Y2Z0 365 aa17.86■□□□□ 0.45
MKS1-207ENST00000578789 CNTNAP1P78357 1384 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 GRIK5Q16478 980 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 PDS5AQ29RF7 1337 aaKnown RBP17.85■□□□□ 0.45
MKS1-207ENST00000578789 WDR66Q8TBY9 1149 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 SERPINA10Q9UK55 444 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 TTF2Q9UNY4 1162 aaKnown RBP17.85■□□□□ 0.45
MKS1-207ENST00000578789 CEP350Q5VT06 3117 aa17.85■□□□□ 0.45
MKS1-207ENST00000578789 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 CELF2O95319 508 aaKnown RBP17.84■□□□□ 0.45
MKS1-207ENST00000578789 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
MKS1-207ENST00000578789 CFAP100Q494V2 611 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 SIRT2Q8IXJ6 389 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
MKS1-207ENST00000578789 MAST3O60307 1309 aa17.83■□□□□ 0.44
MKS1-207ENST00000578789 RASSF10A6NK89 507 aa17.83■□□□□ 0.44
MKS1-207ENST00000578789 HMMRO75330 724 aa17.83■□□□□ 0.44
MKS1-207ENST00000578789 HDLBPQ00341 1268 aaKnown RBP17.83■□□□□ 0.44
MKS1-207ENST00000578789 PCDHAC2Q9Y5I4 1007 aa17.83■□□□□ 0.44
MKS1-207ENST00000578789 THSD7BQ9C0I4 1608 aa17.83■□□□□ 0.44
MKS1-207ENST00000578789 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
MKS1-207ENST00000578789 RASGRF1Q13972 1273 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 DLK2Q6UY11 383 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 ERC1Q8IUD2 1116 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 APOBEC3FQ8IUX4 373 aaKnown RBP17.82■□□□□ 0.44
MKS1-207ENST00000578789 JMYQ8N9B5 988 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 CDCA5Q96FF9 252 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 NEUROD6Q96NK8 337 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 TLL2Q9Y6L7 1015 aa17.82■□□□□ 0.44
MKS1-207ENST00000578789 PAPPA2Q9BXP8 1791 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms