RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 SLC4A4Q9Y6R1 1079 aa19.4■□□□□ 0.7
DDX42-208ENST00000578681 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
DDX42-208ENST00000578681 KCNQ2O43526 872 aa19.39■□□□□ 0.7
DDX42-208ENST00000578681 CYP2E1P05181 493 aaPredicted RBP19.39■□□□□ 0.7
DDX42-208ENST00000578681 COL9A3Q14050 684 aaPredicted RBP19.39■□□□□ 0.7
DDX42-208ENST00000578681 CDC5LQ99459 802 aaKnown RBP19.39■□□□□ 0.7
DDX42-208ENST00000578681 PUS7LQ9H0K6 701 aaKnown RBP19.39■□□□□ 0.7
DDX42-208ENST00000578681 ADCY5O95622 1261 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 CCDC102BQ68D86 513 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
DDX42-208ENST00000578681 UQCRFS1P1P0C7P4 283 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 ANKIB1Q9P2G1 1089 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 TOPAZ1Q8N9V7 1692 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.69
DDX42-208ENST00000578681 BCAMP50895 628 aa19.39■□□□□ 0.69
DDX42-208ENST00000578681 LTN1O94822 1766 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 RASSF8Q8NHQ8 419 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 KDM4FA0A1W2PPD8 638 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 GOLGA8AA7E2F4 631 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 BIN1O00499 593 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 FSIP1Q8NA03 581 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 SLC12A7Q9Y666 1083 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 NCOA3Q9Y6Q9 1424 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 UTYO14607 1347 aa19.38■□□□□ 0.69
DDX42-208ENST00000578681 GNPATO15228 680 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 SCRN1Q12765 414 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 CCAR1Q8IX12 1150 aaKnown RBP19.37■□□□□ 0.69
DDX42-208ENST00000578681 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 PUM3Q15397 648 aaKnown RBP19.37■□□□□ 0.69
DDX42-208ENST00000578681 GTF3C6Q969F1 213 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 ERCC4Q92889 916 aaPredicted RBP19.37■□□□□ 0.69
DDX42-208ENST00000578681 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 TOB2Q14106 344 aaPredicted RBP19.37■□□□□ 0.69
DDX42-208ENST00000578681 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 SLC26A6Q9BXS9 759 aa19.37■□□□□ 0.69
DDX42-208ENST00000578681 PDE8BO95263 885 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 CYP19A1P11511 503 aaPredicted RBP19.36■□□□□ 0.69
DDX42-208ENST00000578681 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 MFSD6Q6ZSS7 791 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 SETDB2Q96T68 719 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 USP42Q9H9J4 1324 aaKnown RBP19.36■□□□□ 0.69
DDX42-208ENST00000578681 LIG1P18858 919 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 FTOQ9C0B1 505 aaKnown RBP eCLIP19.36■□□□□ 0.692e-7■■■□□ 15.9
DDX42-208ENST00000578681 MARCKSP29966 332 aaPredicted RBP19.36■□□□□ 0.69
DDX42-208ENST00000578681 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
DDX42-208ENST00000578681 NOL10Q9BSC4 688 aaKnown RBP19.36■□□□□ 0.69
DDX42-208ENST00000578681 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
DDX42-208ENST00000578681 TRIM22Q8IYM9 498 aa19.35■□□□□ 0.69
DDX42-208ENST00000578681 DSCC1Q9BVC3 393 aa19.35■□□□□ 0.69
DDX42-208ENST00000578681 GYG1P46976 350 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 LPIN2Q92539 896 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
DDX42-208ENST00000578681 TFCP2L1Q9NZI6 479 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 PRDM1O75626 825 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
DDX42-208ENST00000578681 PHKBQ93100 1093 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 WWC3Q9ULE0 1092 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
DDX42-208ENST00000578681 MCAMP43121 646 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 SPATA5Q8NB90 893 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 CBX1P83916 185 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 FILIP1Q7Z7B0 1213 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
DDX42-208ENST00000578681 ZBTB43O43298 467 aa19.33■□□□□ 0.69
DDX42-208ENST00000578681 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.69
DDX42-208ENST00000578681 ANO6Q4KMQ2 910 aa19.33■□□□□ 0.69
DDX42-208ENST00000578681 IPO4Q8TEX9 1081 aaKnown RBP19.33■□□□□ 0.69
DDX42-208ENST00000578681 LEO1Q8WVC0 666 aaPredicted RBP19.33■□□□□ 0.69
DDX42-208ENST00000578681 NLRP3Q96P20 1036 aa19.33■□□□□ 0.69
DDX42-208ENST00000578681 ALG1Q9BT22 464 aa19.33■□□□□ 0.69
DDX42-208ENST00000578681 CIAO1O76071 339 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 RFC4P35249 363 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 STOX1Q6ZVD7 989 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 SMARCC1Q92922 1105 aaPredicted RBP19.33■□□□□ 0.68
DDX42-208ENST00000578681 DNAJC25Q9H1X3 360 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 PDE6AP16499 860 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 LUZP1Q86V48 1076 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 ZSCAN16Q9H4T2 348 aaPredicted RBP19.33■□□□□ 0.68
DDX42-208ENST00000578681 GJB4Q9NTQ9 266 aa19.33■□□□□ 0.68
DDX42-208ENST00000578681 ZNF165P49910 485 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 OVOS2A0A0G2JMS6 1433 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 CDKL5O76039 1030 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 ADD1P35611 737 aaKnown RBP19.32■□□□□ 0.68
DDX42-208ENST00000578681 TPM4P67936 248 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 ZNF609O15014 1411 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 CPDO75976 1380 aa19.32■□□□□ 0.68
DDX42-208ENST00000578681 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
DDX42-208ENST00000578681 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
DDX42-208ENST00000578681 GPR108Q9NPR9 543 aa19.31■□□□□ 0.68
DDX42-208ENST00000578681 PIH1D3Q9NQM4 214 aaKnown RBP19.31■□□□□ 0.68
DDX42-208ENST00000578681 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
DDX42-208ENST00000578681 DDX19AQ9NUU7 478 aaKnown RBP19.3■□□□□ 0.68
DDX42-208ENST00000578681 A0A087WWV3 80 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 A0A1B0GVL5 298 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 SMC2O95347 1197 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 TYRO3Q06418 890 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 DZIP1Q86YF9 867 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms