RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PRC1O43663 620 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FGAP02671 866 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SLC5A1P13866 664 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FGFR2P21802 821 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CCT2P78371 535 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PUM3Q15397 648 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PI16Q6UXB8 463 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NCOA7Q8NI08 942 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 LPIN2Q92539 896 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PGBD1Q96JS3 809 aa10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PIH1D3Q9NQM4 214 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NAP1L2Q9ULW6 460 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZNF213O14771 459 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 KDM4AO75164 1064 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 OFD1O75665 1012 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ADCY5O95622 1261 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PHKA1P46020 1223 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ANTXR2P58335 489 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 HAND2P61296 217 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DDB1Q16531 1140 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 RBM43Q6ZSC3 357 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TNMDQ9H2S6 317 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 USP25Q9UHP3 1055 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 RCOR1Q9UKL0 485 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 RTL9Q8NET4 1388 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DOCK2Q92608 1830 aa10.97□□□□□ -0.65
CDK5RAP3-208ENST00000578525 BCORQ6W2J9 1755 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 C4AP0C0L4 1744 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 C4BP0C0L5 1744 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CAMTA2O94983 1202 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PDE6AP16499 860 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FOSBP53539 338 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TYRO3Q06418 890 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DACT1Q9NYF0 836 aa10.96□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ZNF532Q9HCE3 1301 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TCRBV5S4A2TA0A5A2 114 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GOLGA8BA8MQT2 603 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 IDH1O75874 414 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ATP6V1AP38606 617 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ALX1Q15699 326 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SLC9C2Q5TAH2 1124 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MRVI1Q9Y6F6 885 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ZNF831Q5JPB2 1677 aa10.95□□□□□ -0.66
CDK5RAP3-208ENST00000578525 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CTAGE5O15320 804 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NTSR2O95665 410 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TPM2P07951 284 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FDPSP14324 419 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SIK1P57059 783 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TRDNQ13061 729 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ITPK1Q13572 414 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CAMK4Q16566 473 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MARCH10Q8NA82 808 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SPATA5Q8NB90 893 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ACSBG1Q96GR2 724 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 HPS5Q9UPZ3 1129 aa10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDK5RAP3-208ENST00000578525 A0A0G2JS52 829 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SH2B2O14492 632 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NR1I2O75469 434 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TPM3P06753 285 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 IGHMBP2P38935 993 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms