RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCDC152Q4G0S7 254 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 TATDN2Q93075 761 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 MTFR1LQ9H019 292 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 CASZ1Q86V15 1759 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 SCN7AQ01118 1682 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 PTPN12Q05209 780 aaKnown RBP9.93□□□□□ -0.82
COPS3-215ENST00000578317 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
COPS3-215ENST00000578317 CCDC57Q2TAC2 916 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 CRY2Q49AN0 593 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 KIAA1468Q9P260 1216 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 N4BP2Q86UW6 1770 aaPredicted RBP9.92□□□□□ -0.82
COPS3-215ENST00000578317 C4AP0C0L4 1744 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 BCORQ6W2J9 1755 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 NPHP1O15259 732 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 RAB11FIP3O75154 756 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 NUP98P52948 1817 aa9.92□□□□□ -0.82
COPS3-215ENST00000578317 ANKRD18BA2A2Z9 1011 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 SPDYE5A6NIY4 337 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 SURF6O75683 361 aaKnown RBP9.91□□□□□ -0.82
COPS3-215ENST00000578317 ITGA6P23229 1130 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 HOXA10P31260 410 aaPredicted RBP9.91□□□□□ -0.82
COPS3-215ENST00000578317 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 GREM2Q9H772 168 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 ABCC12Q96J65 1359 aa9.91□□□□□ -0.82
COPS3-215ENST00000578317 CIAO1O76071 339 aa9.9□□□□□ -0.82
COPS3-215ENST00000578317 PDE6BP35913 854 aa9.9□□□□□ -0.82
COPS3-215ENST00000578317 ERC1Q8IUD2 1116 aa9.9□□□□□ -0.82
COPS3-215ENST00000578317 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.82
COPS3-215ENST00000578317 POLD1P28340 1107 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 NUCB1Q02818 461 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
COPS3-215ENST00000578317 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 CDC5LQ99459 802 aaKnown RBP9.89□□□□□ -0.83
COPS3-215ENST00000578317 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 RIPOR2Q9Y4F9 1068 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 EYA2O00167 538 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 IL15P40933 162 aaPredicted RBP9.89□□□□□ -0.83
COPS3-215ENST00000578317 DDX46Q7L014 1031 aaKnown RBP9.89□□□□□ -0.83
COPS3-215ENST00000578317 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 KIF1BPQ96EK5 621 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 CRAMP1Q96RY5 1269 aa9.89□□□□□ -0.83
COPS3-215ENST00000578317 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
COPS3-215ENST00000578317 PA2G4Q9UQ80 394 aaKnown RBP9.89□□□□□ -0.83
COPS3-215ENST00000578317 ANKRD36CQ5JPF3 1778 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
COPS3-215ENST00000578317 BBOX1O75936 387 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 SRGNP10124 158 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 RFC5P40937 340 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 RPS8P62241 208 aaKnown RBP9.88□□□□□ -0.83
COPS3-215ENST00000578317 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.83
COPS3-215ENST00000578317 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 LDHAL6AQ6ZMR3 332 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 ATG9AQ7Z3C6 839 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 KLHDC4Q8TBB5 520 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 POM121Q96HA1 1249 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 SEC31BQ9NQW1 1179 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
COPS3-215ENST00000578317 SASH1O94885 1247 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 NPR1P16066 1061 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 ALDH1B1P30837 517 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 IGHMBP2P38935 993 aaKnown RBP9.87□□□□□ -0.83
COPS3-215ENST00000578317 GRAPQ13588 217 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 TMC4Q7Z404 712 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 CHD1LQ86WJ1 897 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 GRAPLQ8TC17 118 aaPredicted RBP9.87□□□□□ -0.83
COPS3-215ENST00000578317 RHPN1Q8TCX5 695 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 RBM17Q96I25 401 aaKnown RBP9.87□□□□□ -0.83
COPS3-215ENST00000578317 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
COPS3-215ENST00000578317 MPHOSPH8Q99549 860 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 GPR108Q9NPR9 543 aa9.87□□□□□ -0.83
COPS3-215ENST00000578317 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
COPS3-215ENST00000578317 H0YIN7 160 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 TGFB2P61812 414 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 TMEM259Q4ZIN3 620 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 RPGRQ92834 1020 aaKnown RBP9.86□□□□□ -0.83
COPS3-215ENST00000578317 MASTLQ96GX5 879 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 ZNF594Q96JF6 807 aaPredicted RBP9.86□□□□□ -0.83
COPS3-215ENST00000578317 SPON1Q9HCB6 807 aa9.86□□□□□ -0.83
COPS3-215ENST00000578317 GOLGB1Q14789 3259 aaKnown RBP9.86□□□□□ -0.83
COPS3-215ENST00000578317 TK2O00142 265 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 DNAJB2P25686 324 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 OS9Q13438 667 aaPredicted RBP9.85□□□□□ -0.83
COPS3-215ENST00000578317 LRRC24Q50LG9 513 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 STYK1Q6J9G0 422 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
COPS3-215ENST00000578317 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms