RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KRI1Q8N9T8 703 aaKnown RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 TSG101Q99816 390 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 KIAA1468Q9P260 1216 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 ABCC10Q5T3U5 1492 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 UNC5CLQ8IV45 518 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 CWC25Q9NXE8 425 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 NCBP1Q09161 790 aaKnown RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 INCENPQ9NQS7 918 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 PRDM15P57071 1507 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 FLT4P35916 1363 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 PSDA5PKW4 1024 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 SPTLC3Q9NUV7 552 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 AMOTL2Q9Y2J4 779 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 GBP2P32456 591 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 TFCP2Q12800 502 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 MKRN1Q9UHC7 482 aaKnown RBP14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZDHHC9Q9Y397 364 aa14.92□□□□□ -0.02
PCDHGB3-201ENST00000576222 TRIM75PA6NK02 468 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 CDC25BP30305 580 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 SEPT7Q16181 437 aaKnown RBP14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 MTX1Q13505 466 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 WTAPQ15007 396 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 BRD3Q15059 726 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 RTN1Q16799 776 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 LSG1Q9H089 658 aaKnown RBP14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 KCNH3Q9ULD8 1083 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 TTF2Q9UNY4 1162 aaKnown RBP14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 IL15P40933 162 aaPredicted RBP14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 TERF2Q15554 542 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 VPS36Q86VN1 386 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 USP28Q96RU2 1077 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 LUC7L2Q9Y383 392 aaKnown RBP14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 NFE2L3Q9Y4A8 694 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 MAP3K5Q99683 1374 aa14.91□□□□□ -0.02
PCDHGB3-201ENST00000576222 MYO1BO43795 1136 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 CEP57Q86XR8 500 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 TMCO5BA8MYB1 307 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 DDX41Q9UJV9 622 aaKnown RBP14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 PHF8Q9UPP1 1060 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 NCKAP5LQ9HCH0 1330 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 UBXN1Q04323 297 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC122Q5T0U0 273 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 TCP11L1Q9NUJ3 509 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 TOM1L2Q6ZVM7 507 aa14.9□□□□□ -0.02
PCDHGB3-201ENST00000576222 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 CCDC121Q6ZUS5 278 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 CCDC42Q96M95 316 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 MAP3K19Q56UN5 1328 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 PSMA7O14818 248 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 SNRPA1P09661 255 aaKnown RBP14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 EZRP15311 586 aaKnown RBP14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 VAV2P52735 878 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 HELLSQ9NRZ9 838 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 RXRAP19793 462 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 NOP2P46087 812 aaKnown RBP14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 AMPD3Q01432 767 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
PCDHGB3-201ENST00000576222 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 IDEP14735 1019 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 SPECC1LQ69YQ0 1117 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 FBXO38Q6PIJ6 1188 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 IGHMBP2P38935 993 aaKnown RBP14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 AKAP4Q5JQC9 854 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 PPP1R13BQ96KQ4 1090 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 ANKRD18BA2A2Z9 1011 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 CYP2E1P05181 493 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 INPP5BP32019 993 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 IKQ13123 557 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA5Q8TBA6 731 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 KRT23Q9C075 422 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 NDUFAB1O14561 156 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 CCT6AP40227 531 aaKnown RBP14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 ARFGAP2Q8N6H7 521 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 CCDC114Q96M63 670 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 BABAM1Q9NWV8 329 aa14.88□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA6CA6NDK9 693 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 GCOM1H8Y6P7 765 aaPredicted RBP14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 ATP8B1O43520 1251 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 MYZAPP0CAP1 466 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA6DP0CG33 693 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 STAT6P42226 847 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 GOLGA6AQ9NYA3 693 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 CCDC40Q4G0X9 1142 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 B4GALNT4Q76KP1 1039 aa14.87□□□□□ -0.03
PCDHGB3-201ENST00000576222 PPP2R2CQ9Y2T4 447 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms