RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
SMG6-220ENST00000576218 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 LPIN2Q92539 896 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 FAM84BQ96KN1 310 aaPredicted RBP18.93■□□□□ 0.62
SMG6-220ENST00000576218 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 PGAP2Q9UHJ9 254 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 RLBP1P12271 317 aa18.92■□□□□ 0.62
SMG6-220ENST00000576218 RBM5P52756 815 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMG6-220ENST00000576218 FMR1Q06787 632 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMG6-220ENST00000576218 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
SMG6-220ENST00000576218 MFSD14BQ5SR56 506 aa18.92■□□□□ 0.62
SMG6-220ENST00000576218 ATG9AQ7Z3C6 839 aa18.92■□□□□ 0.62
SMG6-220ENST00000576218 COPRSQ9NQ92 184 aa18.92■□□□□ 0.62
SMG6-220ENST00000576218 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMG6-220ENST00000576218 MTX1Q13505 466 aa18.91■□□□□ 0.62
SMG6-220ENST00000576218 DNAJC5GQ8N7S2 189 aa18.91■□□□□ 0.62
SMG6-220ENST00000576218 TDRD7Q8NHU6 1098 aaKnown RBP18.91■□□□□ 0.62
SMG6-220ENST00000576218 GNL3LQ9NVN8 582 aaKnown RBP18.91■□□□□ 0.62
SMG6-220ENST00000576218 ADM5C9JUS6 153 aa18.9■□□□□ 0.62
SMG6-220ENST00000576218 BCAMP50895 628 aa18.9■□□□□ 0.62
SMG6-220ENST00000576218 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
SMG6-220ENST00000576218 GRM1Q13255 1194 aa18.9■□□□□ 0.62
SMG6-220ENST00000576218 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
SMG6-220ENST00000576218 MYO1BO43795 1136 aa18.89■□□□□ 0.61
SMG6-220ENST00000576218 NBPF9Q3BBW0 867 aa18.89■□□□□ 0.61
SMG6-220ENST00000576218 FBXO33Q7Z6M2 555 aa18.89■□□□□ 0.61
SMG6-220ENST00000576218 CERS5Q8N5B7 392 aa18.89■□□□□ 0.61
SMG6-220ENST00000576218 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
SMG6-220ENST00000576218 ASTN2O75129 1339 aaPredicted RBP18.89■□□□□ 0.61
SMG6-220ENST00000576218 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 FGFR2P21802 821 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 DEFB115Q30KQ5 88 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 TBC1D22AQ8WUA7 517 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
SMG6-220ENST00000576218 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
SMG6-220ENST00000576218 FAM205AQ6ZU69 1335 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 CNTNAP1P78357 1384 aa18.88■□□□□ 0.61
SMG6-220ENST00000576218 WNT10BO00744 389 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SMG6-220ENST00000576218 TFCP2Q12800 502 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 TRPM7Q96QT4 1865 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 PITPNM2Q9BZ72 1349 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
SMG6-220ENST00000576218 MVPQ14764 893 aaKnown RBP18.86■□□□□ 0.61
SMG6-220ENST00000576218 CFAP100Q494V2 611 aa18.86■□□□□ 0.61
SMG6-220ENST00000576218 CST9Q5W186 159 aa18.86■□□□□ 0.61
SMG6-220ENST00000576218 APOBEC3FQ8IUX4 373 aaKnown RBP18.86■□□□□ 0.61
SMG6-220ENST00000576218 C2orf69Q8N8R5 385 aa18.86■□□□□ 0.61
SMG6-220ENST00000576218 NEUROD6Q96NK8 337 aa18.86■□□□□ 0.61
SMG6-220ENST00000576218 COG6Q9Y2V7 657 aa18.86■□□□□ 0.61
SMG6-220ENST00000576218 ZNF646O15015 1829 aaPredicted RBP18.86■□□□□ 0.61
SMG6-220ENST00000576218 NF2P35240 595 aa18.85■□□□□ 0.61
SMG6-220ENST00000576218 ATP8B2P98198 1209 aa18.85■□□□□ 0.61
SMG6-220ENST00000576218 DLK2Q6UY11 383 aa18.85■□□□□ 0.61
SMG6-220ENST00000576218 CDCA5Q96FF9 252 aa18.85■□□□□ 0.61
SMG6-220ENST00000576218 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
SMG6-220ENST00000576218 TLL2Q9Y6L7 1015 aa18.85■□□□□ 0.61
SMG6-220ENST00000576218 A0A1B0GUL7 405 aa18.84■□□□□ 0.61
SMG6-220ENST00000576218 RASSF10A6NK89 507 aa18.84■□□□□ 0.61
SMG6-220ENST00000576218 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
SMG6-220ENST00000576218 ECE1P42892 770 aa18.84■□□□□ 0.61
SMG6-220ENST00000576218 WDR66Q8TBY9 1149 aa18.84■□□□□ 0.61
SMG6-220ENST00000576218 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
SMG6-220ENST00000576218 GBA2Q9HCG7 927 aaPredicted RBP18.84■□□□□ 0.61
SMG6-220ENST00000576218 MAST3O60307 1309 aa18.83■□□□□ 0.61
SMG6-220ENST00000576218 VEGFBP49765 207 aa18.83■□□□□ 0.6
SMG6-220ENST00000576218 TTLL12Q14166 644 aaPredicted RBP18.83■□□□□ 0.6
SMG6-220ENST00000576218 CLRN2A0PK11 232 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 ADORA1P30542 326 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 PHKA1P46020 1223 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 HUNKP57058 714 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 TIMM10P62072 90 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 POLA2Q14181 598 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 SAPCD2Q86UD0 394 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 JMYQ8N9B5 988 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 DENND2AQ9ULE3 1009 aa18.82■□□□□ 0.6
SMG6-220ENST00000576218 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
SMG6-220ENST00000576218 POLR2AP24928 1970 aaKnown RBP18.81■□□□□ 0.6
SMG6-220ENST00000576218 ARAP2Q8WZ64 1704 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 MYH13Q9UKX3 1938 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 SEMA3EO15041 775 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 CRKP46108 304 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 CCDC102BQ68D86 513 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 CYP4F22Q6NT55 531 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 MTMR14Q8NCE2 650 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 TEKT1Q969V4 418 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 CAPNS2Q96L46 248 aa18.81■□□□□ 0.6
SMG6-220ENST00000576218 HMMRO75330 724 aa18.8■□□□□ 0.6
SMG6-220ENST00000576218 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
SMG6-220ENST00000576218 AIDAQ96BJ3 306 aa18.8■□□□□ 0.6
SMG6-220ENST00000576218 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
SMG6-220ENST00000576218 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
SMG6-220ENST00000576218 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms