RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 BHMTQ93088 406 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 ZFP42Q96MM3 310 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 STRN4Q9NRL3 753 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 GPN3Q9UHW5 284 aaPredicted RBP11.76□□□□□ -0.53
CALCOCO2-226ENST00000575461 NFKBIEO00221 500 aa11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 PDE2AO00408 941 aaPredicted RBP11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 CRKP46108 304 aa11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 UBAP2LQ14157 1087 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 RNF187Q5TA31 235 aaPredicted RBP11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 SHDQ96IW2 340 aa11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-226ENST00000575461 METTL12A8MUP2 240 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 TRPA1O75762 1119 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 THBS1P07996 1170 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 SMCPP49901 116 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 RASA3Q14644 834 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 PTPROQ16827 1216 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 SEZ6Q53EL9 994 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 MIR1-1HGQ9H1L0 117 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 TMEM39AQ9NV64 488 aa11.74□□□□□ -0.53
CALCOCO2-226ENST00000575461 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 GPLD1P80108 840 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 OR6P1Q8NGX9 317 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 ASAP3Q8TDY4 903 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 PBX4Q9BYU1 374 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
CALCOCO2-226ENST00000575461 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 BNIP3LO60238 219 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 ZNF165P49910 485 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 SIK1P57059 783 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 MPP2Q14168 576 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 PCSK7Q16549 785 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 KCNB2Q92953 911 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 CRBNQ96SW2 442 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 SLC30A3Q99726 388 aa11.72□□□□□ -0.53
CALCOCO2-226ENST00000575461 MAN1A2O60476 641 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 PAGE1O75459 146 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 F13A1P00488 732 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 IGBP1P78318 339 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 FAAP100Q0VG06 881 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 HHIPQ96QV1 700 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 TMX1Q9H3N1 280 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 PPT2Q9UMR5 302 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 CYP8B1Q9UNU6 501 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
CALCOCO2-226ENST00000575461 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 IMPDH2P12268 514 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 GIPRP48546 466 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 LRRC14Q15048 493 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 FAM182BQ5T319 152 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 BNC2Q6ZN30 1099 aaPredicted RBP11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 REXO1Q8N1G1 1221 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 FERD3LQ96RJ6 166 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 RBSNQ9H1K0 784 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 MSRB2Q9Y3D2 182 aa11.7□□□□□ -0.54
CALCOCO2-226ENST00000575461 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 MCM4P33991 863 aa11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 CLEC4MQ9H2X3 399 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 ATXN7L1Q9ULK2 861 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-226ENST00000575461 FAM221AA4D161 298 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 FAM221BA6H8Z2 402 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 GHRHP01286 108 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 NME2P22392 152 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 ACTR10Q9NZ32 417 aa11.68□□□□□ -0.54
CALCOCO2-226ENST00000575461 CD33P20138 364 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 DBN1Q16643 649 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 RAB44Q7Z6P3 723 aaPredicted RBP11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 FBXO27Q8NI29 283 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 PHF24Q9UPV7 400 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
CALCOCO2-226ENST00000575461 CILPO75339 1184 aa11.66□□□□□ -0.54
CALCOCO2-226ENST00000575461 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
CALCOCO2-226ENST00000575461 BMP6P22004 513 aa11.66□□□□□ -0.54
CALCOCO2-226ENST00000575461 PTSQ03393 145 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms