RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
RPA1-206ENST00000573994 LEMD3Q9Y2U8 911 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 ADM5C9JUS6 153 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 PLIN1O60240 522 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 CELF2O95319 508 aaKnown RBP12.59□□□□□ -0.39
RPA1-206ENST00000573994 GRM1Q13255 1194 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 CST9Q5W186 159 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 PODNQ7Z5L7 613 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
RPA1-206ENST00000573994 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 BICC1Q9H694 974 aaKnown RBP12.59□□□□□ -0.39
RPA1-206ENST00000573994 CNNM1Q9NRU3 951 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 GGA3Q9NZ52 723 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 ZNF609O15014 1411 aa12.59□□□□□ -0.39
RPA1-206ENST00000573994 RASSF10A6NK89 507 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 DACT2Q5SW24 774 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 AGBL3Q8NEM8 1001 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 GMLQ99445 158 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 UTYO14607 1347 aa12.58□□□□□ -0.4
RPA1-206ENST00000573994 POTEMA6NI47 508 aa12.57□□□□□ -0.4
RPA1-206ENST00000573994 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
RPA1-206ENST00000573994 DEFB115Q30KQ5 88 aa12.57□□□□□ -0.4
RPA1-206ENST00000573994 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
RPA1-206ENST00000573994 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
RPA1-206ENST00000573994 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
RPA1-206ENST00000573994 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
RPA1-206ENST00000573994 IRS2Q9Y4H2 1338 aa12.57□□□□□ -0.4
RPA1-206ENST00000573994 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
RPA1-206ENST00000573994 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
RPA1-206ENST00000573994 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPA1-206ENST00000573994 SCARF1Q14162 830 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 JAG2Q9Y219 1238 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 TLL2Q9Y6L7 1015 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
RPA1-206ENST00000573994 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
RPA1-206ENST00000573994 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 GTF2IP78347 998 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 ANGEL2Q5VTE6 544 aaKnown RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
RPA1-206ENST00000573994 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
RPA1-206ENST00000573994 PSME4Q14997 1843 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 SNPHO15079 494 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 SASH1O94885 1247 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 COL13A1Q5TAT6 717 aaPredicted RBP12.54□□□□□ -0.4
RPA1-206ENST00000573994 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 SAPCD2Q86UD0 394 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 KIAA0825Q8IV33 1275 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
RPA1-206ENST00000573994 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
RPA1-206ENST00000573994 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
RPA1-206ENST00000573994 FOXN1O15353 648 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 AOC2O75106 756 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 METTL24Q5JXM2 366 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
RPA1-206ENST00000573994 CERS5Q8N5B7 392 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 MYO3BQ8WXR4 1341 aa12.53□□□□□ -0.4
RPA1-206ENST00000573994 F8W031 263 aaPredicted RBP12.52□□□□□ -0.41
RPA1-206ENST00000573994 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
RPA1-206ENST00000573994 GYG1P46976 350 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 MMP14P50281 582 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 OGFOD1Q8N543 542 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 MROH5Q6ZUA9 1318 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
RPA1-206ENST00000573994 THSD7BQ9C0I4 1608 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 TRPM7Q96QT4 1865 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 IL1R1P14778 569 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 ECE1P42892 770 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 HUNKP57058 714 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 MEIS3Q99687 375 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
RPA1-206ENST00000573994 TNNQ9UQP3 1299 aa12.51□□□□□ -0.41
RPA1-206ENST00000573994 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
RPA1-206ENST00000573994 WNT10BO00744 389 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 BCAR3O75815 825 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms