RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 TRAF5O00463 557 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 TCIRG1Q13488 830 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 TRMT112Q9UI30 125 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 CNTNAP1P78357 1384 aa12.03□□□□□ -0.48
NPLOC4-210ENST00000572824 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.48
NPLOC4-210ENST00000572824 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 IQCA1LA6NCM1 817 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 YDJCA8MPS7 323 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 GPC2Q8N158 579 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
NPLOC4-210ENST00000572824 MYH3P11055 1940 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 KDM4AO75164 1064 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 VEGFBP49765 207 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 BCAMP50895 628 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 SKIV2LQ15477 1246 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 SH3TC1Q8TE82 1336 aa12.01□□□□□ -0.49
NPLOC4-210ENST00000572824 FOXN1O15353 648 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 RAD17O75943 681 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
NPLOC4-210ENST00000572824 CXCL9Q07325 125 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 NIM1KQ8IY84 436 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 CNTROBQ8N137 903 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
NPLOC4-210ENST00000572824 KCNQ5Q9NR82 932 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 PSME4Q14997 1843 aa12□□□□□ -0.49
NPLOC4-210ENST00000572824 CFHP08603 1231 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 GRAPQ13588 217 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 TRPM4Q8TD43 1214 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 POLR3EQ9NVU0 708 aa11.99□□□□□ -0.49
NPLOC4-210ENST00000572824 WTIPA6NIX2 430 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 TMEM88BA6NKF7 163 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 EGFRP00533 1210 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 HIRAP54198 1017 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 DPP8Q6V1X1 898 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 RTFDC1Q9BY42 306 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
NPLOC4-210ENST00000572824 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 PPP4CP60510 307 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 USP46P62068 366 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 GPSM2P81274 684 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 KIAA2012Q0VF49 1180 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 DDX46Q7L014 1031 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 TNS4Q8IZW8 715 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 MPNDQ8N594 471 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 MYD88Q99836 296 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 GLIS2Q9BZE0 524 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 DBNDD1Q9H9R9 158 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 POLLQ9UGP5 575 aa11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-210ENST00000572824 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 IRS4O14654 1257 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 HOXB7P09629 217 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 GRM1Q13255 1194 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 CST9Q5W186 159 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 G2E3Q7L622 706 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 ZNRF3Q9ULT6 936 aa11.96□□□□□ -0.49
NPLOC4-210ENST00000572824 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-210ENST00000572824 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 PSMD14O00487 310 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 SPTLC1O15269 473 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms