RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
LITAF-207ENST00000571459 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
LITAF-207ENST00000571459 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
LITAF-207ENST00000571459 EPS15P42566 896 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 SCNN1DP51172 638 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 AGBL3Q8NEM8 1001 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
LITAF-207ENST00000571459 GPRC5DQ9NZD1 345 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
LITAF-207ENST00000571459 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
LITAF-207ENST00000571459 SCN4AP35499 1836 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 IQCA1LA6NCM1 817 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
LITAF-207ENST00000571459 CCDC158Q5M9N0 1113 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 TTC39AQ5SRH9 613 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 DPF2Q92785 391 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 GMLQ99445 158 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 WDR90Q96KV7 1748 aa12.61□□□□□ -0.39
LITAF-207ENST00000571459 SHTN1A0MZ66 631 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 H7C1D1 291 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 SEMA3EO15041 775 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 MFSD14BQ5SR56 506 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
LITAF-207ENST00000571459 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
LITAF-207ENST00000571459 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 ZNF646O15015 1829 aaPredicted RBP12.6□□□□□ -0.39
LITAF-207ENST00000571459 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
LITAF-207ENST00000571459 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
LITAF-207ENST00000571459 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
LITAF-207ENST00000571459 EPHX2P34913 555 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 FKBP1AP62942 108 aaKnown RBP12.59□□□□□ -0.39
LITAF-207ENST00000571459 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 SCARF1Q14162 830 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 RBM26Q5T8P6 1007 aaKnown RBP12.59□□□□□ -0.39
LITAF-207ENST00000571459 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 TBC1D22AQ8WUA7 517 aa12.59□□□□□ -0.39
LITAF-207ENST00000571459 KIF3CO14782 793 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 GRIK5Q16478 980 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
LITAF-207ENST00000571459 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 ADARB2Q9NS39 739 aaKnown RBP12.58□□□□□ -0.4
LITAF-207ENST00000571459 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
LITAF-207ENST00000571459 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
LITAF-207ENST00000571459 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
LITAF-207ENST00000571459 MCAMP43121 646 aa12.57□□□□□ -0.4
LITAF-207ENST00000571459 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 TBC1D10BQ4KMP7 808 aaPredicted RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 HDAC9Q9UKV0 1011 aa12.57□□□□□ -0.4
LITAF-207ENST00000571459 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
LITAF-207ENST00000571459 ZBTB22O15209 634 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 EGFRP00533 1210 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
LITAF-207ENST00000571459 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
LITAF-207ENST00000571459 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 ZAP70P43403 619 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 MMP14P50281 582 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 NUCB1Q02818 461 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 ZGPATQ8N5A5 531 aaKnown RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 OTUD7AQ8TE49 926 aaPredicted RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 GPATCH3Q96I76 525 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 LNPKQ9C0E8 428 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 SUGT1Q9Y2Z0 365 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
LITAF-207ENST00000571459 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
LITAF-207ENST00000571459 CYP2E1P05181 493 aaPredicted RBP12.54□□□□□ -0.4
LITAF-207ENST00000571459 ATP5JP18859 108 aa12.54□□□□□ -0.4
LITAF-207ENST00000571459 PRDX5P30044 214 aa12.54□□□□□ -0.4
LITAF-207ENST00000571459 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
LITAF-207ENST00000571459 KIF4BQ2VIQ3 1234 aa12.54□□□□□ -0.4
LITAF-207ENST00000571459 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
LITAF-207ENST00000571459 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
LITAF-207ENST00000571459 CHD1LQ86WJ1 897 aa12.54□□□□□ -0.4
LITAF-207ENST00000571459 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms