RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.78	□□□□□ -0.2
ABR-208	ENST00000570688	ASTN2	O75129	1339 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-208	ENST00000570688	HMMR	O75330	724 aa		13.77	□□□□□ -0.21
ABR-208	ENST00000570688	OS9	Q13438	667 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-208	ENST00000570688	HDAC1	Q13547	482 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-208	ENST00000570688	TTLL5	Q6EMB2	1281 aa		13.77	□□□□□ -0.21
ABR-208	ENST00000570688	KDM2B	Q8NHM5	1336 aa		13.77	□□□□□ -0.21
ABR-208	ENST00000570688	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.77	□□□□□ -0.21
ABR-208	ENST00000570688	ZBTB22	O15209	634 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	MCAM	P43121	646 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	TNIP1	Q15025	636 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	SAMD7	Q7Z3H4	446 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	MICALL2	Q8IY33	904 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	ZNF384	Q8TF68	577 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	DPF2	Q92785	391 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	NEUROD6	Q96NK8	337 aa		13.76	□□□□□ -0.21
ABR-208	ENST00000570688	CNOT7	Q9UIV1	285 aa	Known RBP	13.76	□□□□□ -0.21
ABR-208	ENST00000570688	VEGFA	P15692	232 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-208	ENST00000570688	ARID4A	P29374	1257 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-208	ENST00000570688	EPHX2	P34913	555 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	ZNF280A	P59817	542 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-208	ENST00000570688	CHAF1A	Q13111	956 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-208	ENST00000570688	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.75	□□□□□ -0.21
ABR-208	ENST00000570688	KIF1BP	Q96EK5	621 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	HMG20B	Q9P0W2	317 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	HACL1	Q9UJ83	578 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	AKAP2	Q9Y2D5	859 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	NDUFB9	Q9Y6M9	179 aa		13.75	□□□□□ -0.21
ABR-208	ENST00000570688	SALL3	Q9BXA9	1300 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688		G3V3G9	751 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	RAB11FIP3	O75154	756 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	CAVIN4	Q5BKX8	364 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	DCAF8	Q5TAQ9	597 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	DLK2	Q6UY11	383 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	AACS	Q86V21	672 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	KIAA0825	Q8IV33	1275 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	SMC5	Q8IY18	1101 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	AGBL3	Q8NEM8	1001 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	FBXW7	Q969H0	707 aa		13.74	□□□□□ -0.21
ABR-208	ENST00000570688	ZBED3	Q96IU2	234 aa	Predicted RBP	13.74	□□□□□ -0.21
ABR-208	ENST00000570688	RPS12	P25398	132 aa	Known RBP	13.73	□□□□□ -0.21
ABR-208	ENST00000570688	PRDX5	P30044	214 aa		13.73	□□□□□ -0.21
ABR-208	ENST00000570688	FKBP1A	P62942	108 aa	Known RBP	13.73	□□□□□ -0.21
ABR-208	ENST00000570688	FMR1	Q06787	632 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
ABR-208	ENST00000570688	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.73	□□□□□ -0.21
ABR-208	ENST00000570688	MFSD14B	Q5SR56	506 aa		13.73	□□□□□ -0.21
ABR-208	ENST00000570688	ERC1	Q8IUD2	1116 aa		13.73	□□□□□ -0.21
ABR-208	ENST00000570688	SNRK	Q9NRH2	765 aa		13.73	□□□□□ -0.21
ABR-208	ENST00000570688	DOCK2	Q92608	1830 aa		13.73	□□□□□ -0.21
ABR-208	ENST00000570688		F8W031	263 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-208	ENST00000570688	AAMP	Q13685	434 aa		13.72	□□□□□ -0.21
ABR-208	ENST00000570688	HSP90AB4P	Q58FF6	505 aa		13.72	□□□□□ -0.21
ABR-208	ENST00000570688	TSHZ3	Q63HK5	1081 aa		13.72	□□□□□ -0.21
ABR-208	ENST00000570688	TBC1D9	Q6ZT07	1266 aa		13.72	□□□□□ -0.21
ABR-208	ENST00000570688	LRRCC1	Q9C099	1032 aa		13.72	□□□□□ -0.21
ABR-208	ENST00000570688	USP17L8	P0C7I0	530 aa		13.71	□□□□□ -0.21
ABR-208	ENST00000570688	ZAP70	P43403	619 aa		13.71	□□□□□ -0.21
ABR-208	ENST00000570688	VPS37D	Q86XT2	251 aa		13.71	□□□□□ -0.21
ABR-208	ENST00000570688	EDC3	Q96F86	508 aa	Known RBP	13.71	□□□□□ -0.21
ABR-208	ENST00000570688	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-208	ENST00000570688	BCL11A	Q9H165	835 aa		13.71	□□□□□ -0.21
ABR-208	ENST00000570688	ANTXR1	Q9H6X2	564 aa		13.71	□□□□□ -0.21
ABR-208	ENST00000570688	ADARB2	Q9NS39	739 aa	Known RBP	13.71	□□□□□ -0.21
ABR-208	ENST00000570688	SCAF8	Q9UPN6	1271 aa	Known RBP	13.71	□□□□□ -0.21
ABR-208	ENST00000570688	ECM29	Q5VYK3	1845 aa		13.71	□□□□□ -0.22
ABR-208	ENST00000570688	MYH2	Q9UKX2	1941 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	PDS5A	Q29RF7	1337 aa	Known RBP	13.7	□□□□□ -0.22
ABR-208	ENST00000570688	SALL1	Q9NSC2	1324 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	CYP2E1	P05181	493 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-208	ENST00000570688	NBPF9	Q3BBW0	867 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	RBM26	Q5T8P6	1007 aa	Known RBP	13.7	□□□□□ -0.22
ABR-208	ENST00000570688	SPATA5	Q8NB90	893 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	MYOZ2	Q9NPC6	264 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	PIH1D3	Q9NQM4	214 aa	Known RBP	13.7	□□□□□ -0.22
ABR-208	ENST00000570688	PGAP2	Q9UHJ9	254 aa		13.7	□□□□□ -0.22
ABR-208	ENST00000570688	WNT10B	O00744	389 aa		13.69	□□□□□ -0.22
ABR-208	ENST00000570688	SEMA3E	O15041	775 aa		13.69	□□□□□ -0.22
ABR-208	ENST00000570688	ITGBL1	O95965	494 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-208	ENST00000570688	DIXDC1	Q155Q3	683 aa		13.69	□□□□□ -0.22
ABR-208	ENST00000570688	KIF4B	Q2VIQ3	1234 aa		13.69	□□□□□ -0.22
ABR-208	ENST00000570688	EAPP	Q56P03	285 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-208	ENST00000570688	MAP1S	Q66K74	1059 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-208	ENST00000570688	CLASRP	Q8N2M8	674 aa	Known RBP	13.69	□□□□□ -0.22
ABR-208	ENST00000570688	DENND2A	Q9ULE3	1009 aa		13.69	□□□□□ -0.22
ABR-208	ENST00000570688	MYO3B	Q8WXR4	1341 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	TOMM70	O94826	608 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	CHGB	P05060	677 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	PDE4A	P27815	886 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	LMOD1	P29536	600 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-208	ENST00000570688	TTC39A	Q5SRH9	613 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	USP50	Q70EL3	339 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-208	ENST00000570688	SKAP1	Q86WV1	359 aa		13.68	□□□□□ -0.22
ABR-208	ENST00000570688	PRMT6	Q96LA8	375 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-208	ENST00000570688	TTF2	Q9UNY4	1162 aa	Known RBP	13.68	□□□□□ -0.22
ABR-208	ENST00000570688		H7C1D1	291 aa		13.67	□□□□□ -0.22
ABR-208	ENST00000570688	FRAT2	O75474	233 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-208	ENST00000570688	UQCRFS1P1	P0C7P4	283 aa		13.67	□□□□□ -0.22
ABR-208	ENST00000570688	CFAP100	Q494V2	611 aa		13.67	□□□□□ -0.22
ABR-208	ENST00000570688	SLFNL1	Q499Z3	407 aa		13.67	□□□□□ -0.22

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