RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 H7C1D1 291 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 APBB1O00213 710 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 SURF6O75683 361 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 IL15P40933 162 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 CST9Q5W186 159 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 PI16Q6UXB8 463 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 COL1A1P02452 1464 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-212ENST00000570129 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 LPIN2Q92539 896 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 XAGE2Q96GT9 111 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
GTF3C1-212ENST00000570129 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 FAM205AQ6ZU69 1335 aa12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.464e-6■■□□□ 13.6
GTF3C1-212ENST00000570129 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 ZBED3Q96IU2 234 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 CCDC8Q9H0W5 538 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 ZNF646O15015 1829 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-212ENST00000570129 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 SLC5A1P13866 664 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 APLP1P51693 650 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 MFSD14BQ5SR56 506 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 DBNDD2Q9BQY9 259 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 IL1RAPL2Q9NP60 686 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 GGA3Q9NZ52 723 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
GTF3C1-212ENST00000570129 SCN4AP35499 1836 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 CLRN2A0PK11 232 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 WNT10BO00744 389 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 EAF2Q96CJ1 260 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 MKRN1Q9UHC7 482 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
GTF3C1-212ENST00000570129 FRAT2O75474 233 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 CFAP100Q494V2 611 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 CAVIN4Q5BKX8 364 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 ZNF384Q8TF68 577 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
GTF3C1-212ENST00000570129 CELF2O95319 508 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 MS4A1P11836 297 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 PRDX5P30044 214 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 CACNB3P54284 484 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 EXOC6Q8TAG9 804 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-212ENST00000570129 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
GTF3C1-212ENST00000570129 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-212ENST00000570129 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 MCAMP43121 646 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 CRKP46108 304 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 PRKG1Q13976 671 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 DLGAP5Q15398 846 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-212ENST00000570129 ZNF609O15014 1411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms