RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ITGA6P23229 1130 aa16■□□□□ 0.15
SNX29-207ENST00000568949 KCNJ4P48050 445 aa16■□□□□ 0.15
SNX29-207ENST00000568949 IREB2P48200 963 aaKnown RBP16■□□□□ 0.15
SNX29-207ENST00000568949 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
SNX29-207ENST00000568949 SP3Q02447 781 aa16■□□□□ 0.15
SNX29-207ENST00000568949 CWF19L2Q2TBE0 894 aaKnown RBP16■□□□□ 0.15
SNX29-207ENST00000568949 C15orf52Q6ZUT6 534 aaKnown RBP16■□□□□ 0.15
SNX29-207ENST00000568949 UBE3BQ7Z3V4 1068 aa16■□□□□ 0.15
SNX29-207ENST00000568949 CERS5Q8N5B7 392 aa16■□□□□ 0.15
SNX29-207ENST00000568949 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 APAF1O14727 1248 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 CSF1RP07333 972 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNX29-207ENST00000568949 CHRNDQ07001 517 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
SNX29-207ENST00000568949 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 USP2O75604 605 aaPredicted RBP15.98■□□□□ 0.15
SNX29-207ENST00000568949 GJA5P36382 358 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 ARHGEF6Q15052 776 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 CFAP100Q494V2 611 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 NBPF12Q5TAG4 269 aaPredicted RBP15.98■□□□□ 0.15
SNX29-207ENST00000568949 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 PTPN18Q99952 460 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
SNX29-207ENST00000568949 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
SNX29-207ENST00000568949 CLRN2A0PK11 232 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 IL1R1P14778 569 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 GCKRQ14397 625 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 ZNF333Q96JL9 665 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 PRMT6Q96LA8 375 aaPredicted RBP15.97■□□□□ 0.15
SNX29-207ENST00000568949 PCDHAC2Q9Y5I4 1007 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 HTTP42858 3142 aa15.97■□□□□ 0.15
SNX29-207ENST00000568949 CASP7P55210 303 aa15.96■□□□□ 0.15
SNX29-207ENST00000568949 VEZTQ9HBM0 779 aa15.96■□□□□ 0.15
SNX29-207ENST00000568949 CEP290O15078 2479 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 ANKRD18BA2A2Z9 1011 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 F8W031 263 aaPredicted RBP15.95■□□□□ 0.14
SNX29-207ENST00000568949 CAP1Q01518 475 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 RASA3Q14644 834 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 MYH16Q9H6N6 1097 aa15.95■□□□□ 0.14
SNX29-207ENST00000568949 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
SNX29-207ENST00000568949 OPTNQ96CV9 577 aa15.94■□□□□ 0.14
SNX29-207ENST00000568949 MS4A4AQ96JQ5 239 aa15.94■□□□□ 0.14
SNX29-207ENST00000568949 MKI67P46013 3256 aaKnown RBP15.94■□□□□ 0.14
SNX29-207ENST00000568949 OTOFQ9HC10 1997 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 A0A1B0GUL6 1792 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 SNAP23O00161 211 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 TAF5LO75529 589 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 DDX10Q13206 875 aaKnown RBP15.93■□□□□ 0.14
SNX29-207ENST00000568949 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 G2E3Q7L622 706 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 ZFYVE28Q9HCC9 887 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
SNX29-207ENST00000568949 TRIOBPQ9H2D6 2365 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 AOX1Q06278 1338 aa15.93■□□□□ 0.14
SNX29-207ENST00000568949 GTF2A2P52657 109 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 RBM5P52756 815 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNX29-207ENST00000568949 TAF1CQ15572 869 aaPredicted RBP15.92■□□□□ 0.14
SNX29-207ENST00000568949 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 HELBQ8NG08 1087 aaPredicted RBP15.92■□□□□ 0.14
SNX29-207ENST00000568949 LINS1Q8NG48 757 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 BRI3BPQ8WY22 251 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 ELP3Q9H9T3 547 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 FAM205AQ6ZU69 1335 aa15.92■□□□□ 0.14
SNX29-207ENST00000568949 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
SNX29-207ENST00000568949 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
SNX29-207ENST00000568949 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
SNX29-207ENST00000568949 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
SNX29-207ENST00000568949 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.91■□□□□ 0.14
SNX29-207ENST00000568949 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
SNX29-207ENST00000568949 ZNF70Q9UC06 446 aaPredicted RBP15.91■□□□□ 0.14
SNX29-207ENST00000568949 PTCH2Q9Y6C5 1203 aa15.91■□□□□ 0.14
SNX29-207ENST00000568949 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 MAP3K9P80192 1104 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 FLIIQ13045 1269 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 CCL15Q16663 113 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 TSR2Q969E8 191 aaKnown RBP15.9■□□□□ 0.14
SNX29-207ENST00000568949 TEPSINQ96N21 525 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 SERPINA10Q9UK55 444 aa15.9■□□□□ 0.14
SNX29-207ENST00000568949 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
SNX29-207ENST00000568949 FOXO4P98177 505 aa15.89■□□□□ 0.13
SNX29-207ENST00000568949 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
SNX29-207ENST00000568949 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
SNX29-207ENST00000568949 GNRH1P01148 92 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
SNX29-207ENST00000568949 VGLL4Q14135 290 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 FAM43AQ8N2R8 423 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNX29-207ENST00000568949 TDRD7Q8NHU6 1098 aaKnown RBP15.88■□□□□ 0.13
SNX29-207ENST00000568949 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
SNX29-207ENST00000568949 TDRD3Q9H7E2 651 aaKnown RBP15.88■□□□□ 0.13
SNX29-207ENST00000568949 TTF2Q9UNY4 1162 aaKnown RBP15.88■□□□□ 0.13
SNX29-207ENST00000568949 CSADQ9Y600 493 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms