RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ADAMTS2O95450 1211 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 ZNF165P49910 485 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 HDGFL1Q5TGJ6 251 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 TXLNBQ8N3L3 684 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 SSH3Q8TE77 659 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 RILPL2Q969X0 211 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 PHAXQ9H814 394 aaKnown RBP6.38□□□□□ -1.39
LINC01541-202ENST00000568095 DACT1Q9NYF0 836 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 PSD3Q9NYI0 1048 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 PSDA5PKW4 1024 aaPredicted RBP6.37□□□□□ -1.39
LINC01541-202ENST00000568095 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 RAB11FIP3O75154 756 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 GNAI3P08754 354 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 SKILP12757 684 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 EVA1CP58658 441 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 ME3Q16798 604 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 LEO1Q8WVC0 666 aaPredicted RBP6.37□□□□□ -1.39
LINC01541-202ENST00000568095 ZNF592Q92610 1267 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC01541-202ENST00000568095 IMPACTQ9P2X3 320 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 ARAP2Q8WZ64 1704 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 ERICH4A6NGS2 130 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 ARID5BQ14865 1188 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 BEND3Q5T5X7 828 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 CCDC83Q8IWF9 413 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 DHX40Q8IX18 779 aaKnown RBP6.37□□□□□ -1.39
LINC01541-202ENST00000568095 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 GOPCQ9HD26 462 aa6.37□□□□□ -1.39
LINC01541-202ENST00000568095 NBPF26B4DH59 902 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NECTIN1Q15223 517 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CAMK4Q16566 473 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NBPF14Q5TI25 921 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 E4F1Q66K89 784 aaPredicted RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NBPF10Q6P3W6 841 aaKnown RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CDC37L1Q7L3B6 337 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NBPF15Q8N660 670 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CCDC69A6NI79 296 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NR1I2O75469 434 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 SNRPA1P09661 255 aaKnown RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 GSDMDP57764 484 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CABP4P57796 275 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 PDRG1Q9NUG6 133 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 GEMIN8Q9NWZ8 242 aaKnown RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 V9GYY5 206 aaPredicted RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 CASTP20810 708 aaKnown RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 PDCP20941 246 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 IRX3P78415 501 aaPredicted RBP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 MCM6Q14566 821 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 ERCC6LQ2NKX8 1250 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 ADCK5Q3MIX3 580 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 LRRN4CLQ8ND94 238 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 PPP1R13BQ96KQ4 1090 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC01541-202ENST00000568095 TPCN1Q9ULQ1 816 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 PHLPP2Q6ZVD8 1323 aa6.36□□□□□ -1.39
LINC01541-202ENST00000568095 F6X3S4 739 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 CTAGE5O15320 804 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 MMP14P50281 582 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 TPM4P67936 248 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 C11orf57Q6ZUT1 292 aaPredicted RBP6.35□□□□□ -1.39
LINC01541-202ENST00000568095 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 REXO1L1PQ8IX06 675 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 DHX8Q14562 1220 aaKnown RBP6.35□□□□□ -1.39
LINC01541-202ENST00000568095 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
LINC01541-202ENST00000568095 CTR9Q6PD62 1173 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 TEX2Q8IWB9 1127 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 BPIFA3Q9BQP9 254 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 USP44Q9H0E7 712 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 RASSF4Q9H2L5 321 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 ASAP1Q9ULH1 1129 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 CYP46A1Q9Y6A2 500 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 AFF2P51816 1311 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 TTC41PQ6P2S7 1318 aa6.35□□□□□ -1.39
LINC01541-202ENST00000568095 NRXN2Q9P2S2 1712 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 NUTM2BA6NNL0 878 aaPredicted RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 NUTM2EB1AL46 878 aaPredicted RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 RPS6KA5O75582 802 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 CASP7P55210 303 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 RESTQ13127 1097 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 STX1AQ16623 288 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 TEX35Q5T0J7 233 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 NUTM2AQ8IVF1 878 aaPredicted RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 CNTROBQ8N137 903 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 MSL3Q8N5Y2 521 aaKnown RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 GTF3C6Q969F1 213 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 SMARCE1Q969G3 411 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 LARP6Q9BRS8 491 aaKnown RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 SRRTQ9BXP5 876 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms