RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
LINC00564-201ENST00000567258 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
LINC00564-201ENST00000567258 SCN9AQ15858 1988 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 COL4A1P02462 1669 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 H7C1W4 665 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 ECE1P42892 770 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 VEGFBP49765 207 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
LINC00564-201ENST00000567258 GREM2Q9H772 168 aa13.16□□□□□ -0.3
LINC00564-201ENST00000567258 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
LINC00564-201ENST00000567258 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
LINC00564-201ENST00000567258 GRM1Q13255 1194 aa13.15□□□□□ -0.3
LINC00564-201ENST00000567258 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
LINC00564-201ENST00000567258 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
LINC00564-201ENST00000567258 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
LINC00564-201ENST00000567258 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
LINC00564-201ENST00000567258 TRAF5O00463 557 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
LINC00564-201ENST00000567258 ITGA6P23229 1130 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 KCNJ4P48050 445 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
LINC00564-201ENST00000567258 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 TNS4Q8IZW8 715 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
LINC00564-201ENST00000567258 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
LINC00564-201ENST00000567258 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 PTPN5P54829 565 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 COL13A1Q5TAT6 717 aaPredicted RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 SLC4A10Q6U841 1118 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
LINC00564-201ENST00000567258 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
LINC00564-201ENST00000567258 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 F6X3S4 739 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
LINC00564-201ENST00000567258 FMR1Q06787 632 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00564-201ENST00000567258 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
LINC00564-201ENST00000567258 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 RSBN1LQ6PCB5 846 aaPredicted RBP13.12□□□□□ -0.31
LINC00564-201ENST00000567258 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
LINC00564-201ENST00000567258 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 CTCFP49711 727 aaPredicted RBP13.11□□□□□ -0.31
LINC00564-201ENST00000567258 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 CST9Q5W186 159 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 USP48Q86UV5 1035 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
LINC00564-201ENST00000567258 E9PSI1 815 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 CSF1RP07333 972 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 COA1Q9GZY4 146 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
LINC00564-201ENST00000567258 GRM8O00222 908 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 FOXN1O15353 648 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 CASP7P55210 303 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 CYP4F22Q6NT55 531 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
LINC00564-201ENST00000567258 CHRNDQ07001 517 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 HHIPL1Q96JK4 782 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
LINC00564-201ENST00000567258 A0A1B0GUL6 1792 aa13.07□□□□□ -0.32
LINC00564-201ENST00000567258 MAP2K2P36507 400 aa13.07□□□□□ -0.32
LINC00564-201ENST00000567258 MMP14P50281 582 aa13.07□□□□□ -0.32
LINC00564-201ENST00000567258 HUNKP57058 714 aa13.07□□□□□ -0.32
LINC00564-201ENST00000567258 SCARF1Q14162 830 aa13.07□□□□□ -0.32
LINC00564-201ENST00000567258 STRIP1Q5VSL9 837 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms