RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ERICH6BQ5W0A0 696 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 LPIN2Q92539 896 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 LRRCC1Q9C099 1032 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 FPGT-TNNI3KV9GXZ4 949 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 IRS2Q9Y4H2 1338 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 TTLL13PA6NNM8 815 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 NIM1KQ8IY84 436 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 ZC3H12CQ9C0D7 883 aaKnown RBP14.12□□□□□ -0.15
KARS-207ENST00000566560 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 VPS33BQ9H267 617 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 GPR108Q9NPR9 543 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
KARS-207ENST00000566560 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 SCN9AQ15858 1988 aa14.12□□□□□ -0.15
KARS-207ENST00000566560 C15orf52Q6ZUT6 534 aaKnown RBP14.11□□□□□ -0.15
KARS-207ENST00000566560 ZNF804AQ7Z570 1209 aa14.11□□□□□ -0.15
KARS-207ENST00000566560 AACSQ86V21 672 aa14.11□□□□□ -0.15
KARS-207ENST00000566560 TXNRD3Q86VQ6 643 aa14.11□□□□□ -0.15
KARS-207ENST00000566560 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
KARS-207ENST00000566560 CLASRPQ8N2M8 674 aaKnown RBP14.11□□□□□ -0.15
KARS-207ENST00000566560 CCDC136Q96JN2 1154 aa14.11□□□□□ -0.15
KARS-207ENST00000566560 ZNF646O15015 1829 aaPredicted RBP14.11□□□□□ -0.15
KARS-207ENST00000566560 G3V3G9 751 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
KARS-207ENST00000566560 ECE2O60344 883 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 ADORA1P30542 326 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 GYG1P46976 350 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 C9orf131Q5VYM1 1079 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 VPS37DQ86XT2 251 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
KARS-207ENST00000566560 JDP2Q8WYK2 163 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 NEUROD6Q96NK8 337 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 DBNDD1Q9H9R9 158 aa14.1□□□□□ -0.15
KARS-207ENST00000566560 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
KARS-207ENST00000566560 CAVIN4Q5BKX8 364 aa14.09□□□□□ -0.15
KARS-207ENST00000566560 EAF2Q96CJ1 260 aaPredicted RBP14.09□□□□□ -0.15
KARS-207ENST00000566560 XAGE2Q96GT9 111 aa14.09□□□□□ -0.15
KARS-207ENST00000566560 DBNDD2Q9BQY9 259 aa14.09□□□□□ -0.15
KARS-207ENST00000566560 COA1Q9GZY4 146 aa14.09□□□□□ -0.15
KARS-207ENST00000566560 RYDENQ9NUL5 291 aaKnown RBP14.09□□□□□ -0.15
KARS-207ENST00000566560 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
KARS-207ENST00000566560 DBNLQ9UJU6 430 aaKnown RBP14.09□□□□□ -0.15
KARS-207ENST00000566560 IFIT2P09913 472 aaKnown RBP14.08□□□□□ -0.16
KARS-207ENST00000566560 HIBADHP31937 336 aaKnown RBP14.08□□□□□ -0.16
KARS-207ENST00000566560 TIMM10P62072 90 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 GORABQ5T7V8 394 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 ANKRD45Q5TZF3 282 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 B4GALNT3Q6L9W6 998 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 EFCAB3Q8N7B9 438 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 CCDC8Q9H0W5 538 aaPredicted RBP14.08□□□□□ -0.16
KARS-207ENST00000566560 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 UTRNP46939 3433 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
KARS-207ENST00000566560 COL1A1P02452 1464 aaPredicted RBP14.07□□□□□ -0.16
KARS-207ENST00000566560 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
KARS-207ENST00000566560 PHKA1P46020 1223 aa14.07□□□□□ -0.16
KARS-207ENST00000566560 BCAMP50895 628 aa14.07□□□□□ -0.16
KARS-207ENST00000566560 CCDC102BQ68D86 513 aa14.07□□□□□ -0.16
KARS-207ENST00000566560 CENPQQ7L2Z9 268 aaPredicted RBP14.07□□□□□ -0.16
KARS-207ENST00000566560 FAM84BQ96KN1 310 aaPredicted RBP14.07□□□□□ -0.16
KARS-207ENST00000566560 ZNRF3Q9ULT6 936 aa14.07□□□□□ -0.16
KARS-207ENST00000566560 ZC3H4Q9UPT8 1303 aaKnown RBP14.07□□□□□ -0.16
KARS-207ENST00000566560 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
KARS-207ENST00000566560 FBXO33Q7Z6M2 555 aa14.06□□□□□ -0.16
KARS-207ENST00000566560 LNPKQ9C0E8 428 aa14.06□□□□□ -0.16
KARS-207ENST00000566560 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
KARS-207ENST00000566560 GNL3LQ9NVN8 582 aaKnown RBP14.06□□□□□ -0.16
KARS-207ENST00000566560 ZNF541Q9H0D2 1346 aa14.06□□□□□ -0.16
KARS-207ENST00000566560 AKAP11Q9UKA4 1901 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 IL1R1P14778 569 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 EIF6P56537 245 aaKnown RBP14.05□□□□□ -0.16
KARS-207ENST00000566560 NUCB1Q02818 461 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 CCDC158Q5M9N0 1113 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 TTC39AQ5SRH9 613 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
KARS-207ENST00000566560 PODNQ7Z5L7 613 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 CHD1LQ86WJ1 897 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
KARS-207ENST00000566560 IQSEC3Q9UPP2 1182 aaPredicted RBP14.05□□□□□ -0.16
KARS-207ENST00000566560 MAST2Q6P0Q8 1798 aa14.04□□□□□ -0.16
KARS-207ENST00000566560 FZD9O00144 591 aa14.04□□□□□ -0.16
KARS-207ENST00000566560 FRAT2O75474 233 aaPredicted RBP14.04□□□□□ -0.16
KARS-207ENST00000566560 ARID4AP29374 1257 aaPredicted RBP14.04□□□□□ -0.16
KARS-207ENST00000566560 TDRD7Q8NHU6 1098 aaKnown RBP14.04□□□□□ -0.16
KARS-207ENST00000566560 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
KARS-207ENST00000566560 SEMA3EO15041 775 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 RAD17O75943 681 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 UQCRFS1P1P0C7P4 283 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
KARS-207ENST00000566560 RASGRF1Q13972 1273 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 CIAPIN1Q6FI81 312 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
KARS-207ENST00000566560 JAG2Q9Y219 1238 aa14.03□□□□□ -0.16
KARS-207ENST00000566560 USP17L3A6NCW0 530 aa14.02□□□□□ -0.17
KARS-207ENST00000566560 USP17L4A6NCW7 530 aa14.02□□□□□ -0.17
KARS-207ENST00000566560 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.17
KARS-207ENST00000566560 MX1P20591 662 aa14.02□□□□□ -0.17
KARS-207ENST00000566560 GTF2IP78347 998 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms