RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-214ENST00000566230 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
COMMD4-214ENST00000566230 TAF5LO75529 589 aa17.11■□□□□ 0.33
COMMD4-214ENST00000566230 INHBEP58166 350 aa17.11■□□□□ 0.33
COMMD4-214ENST00000566230 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-214ENST00000566230 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
COMMD4-214ENST00000566230 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-214ENST00000566230 WNK4Q96J92 1243 aa17.11■□□□□ 0.33
COMMD4-214ENST00000566230 AOX1Q06278 1338 aa17.11■□□□□ 0.33
COMMD4-214ENST00000566230 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-214ENST00000566230 KCNJ4P48050 445 aa17.1■□□□□ 0.33
COMMD4-214ENST00000566230 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
COMMD4-214ENST00000566230 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
COMMD4-214ENST00000566230 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
COMMD4-214ENST00000566230 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
COMMD4-214ENST00000566230 MKI67P46013 3256 aaKnown RBP17.09■□□□□ 0.33
COMMD4-214ENST00000566230 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 POTEFA5A3E0 1075 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 IL1R1P14778 569 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 GJA5P36382 358 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 FLIIQ13045 1269 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 NBPF12Q5TAG4 269 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-214ENST00000566230 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-214ENST00000566230 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
COMMD4-214ENST00000566230 CENPFP49454 3210 aa17.08■□□□□ 0.33
COMMD4-214ENST00000566230 RBBP6Q7Z6E9 1792 aaKnown RBP17.08■□□□□ 0.33
COMMD4-214ENST00000566230 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-214ENST00000566230 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-214ENST00000566230 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-214ENST00000566230 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 FOXO4P98177 505 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 CFAP100Q494V2 611 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 LINS1Q8NG48 757 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 OTOFQ9HC10 1997 aa17.08■□□□□ 0.32
COMMD4-214ENST00000566230 UNCXA6NJT0 531 aa17.07■□□□□ 0.32
COMMD4-214ENST00000566230 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
COMMD4-214ENST00000566230 SUPT20HL1Q3ZLR7 823 aa17.07■□□□□ 0.32
COMMD4-214ENST00000566230 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
COMMD4-214ENST00000566230 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
COMMD4-214ENST00000566230 CAP1Q01518 475 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 CRHR2Q13324 411 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 FKBP5Q13451 457 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-214ENST00000566230 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 PTPN18Q99952 460 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 JAG2Q9Y219 1238 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 PTPN22Q9Y2R2 807 aa17.06■□□□□ 0.32
COMMD4-214ENST00000566230 RASA3Q14644 834 aa17.05■□□□□ 0.32
COMMD4-214ENST00000566230 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
COMMD4-214ENST00000566230 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
COMMD4-214ENST00000566230 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
COMMD4-214ENST00000566230 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
COMMD4-214ENST00000566230 CEP290O15078 2479 aa17.04■□□□□ 0.32
COMMD4-214ENST00000566230 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-214ENST00000566230 MYO1BO43795 1136 aa17.04■□□□□ 0.32
COMMD4-214ENST00000566230 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
COMMD4-214ENST00000566230 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
COMMD4-214ENST00000566230 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
COMMD4-214ENST00000566230 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
COMMD4-214ENST00000566230 IL16Q14005 1332 aa17.03■□□□□ 0.32
COMMD4-214ENST00000566230 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
COMMD4-214ENST00000566230 ANKRD13AQ8IZ07 590 aa17.03■□□□□ 0.32
COMMD4-214ENST00000566230 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
COMMD4-214ENST00000566230 ZNF594Q96JF6 807 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-214ENST00000566230 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 F6X3S4 739 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 VAMP4O75379 141 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
COMMD4-214ENST00000566230 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
COMMD4-214ENST00000566230 BEND3Q5T5X7 828 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 ARMC5Q96C12 935 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 EFCC1Q9HA90 598 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 ZNF70Q9UC06 446 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-214ENST00000566230 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
COMMD4-214ENST00000566230 PLIN1O60240 522 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-214ENST00000566230 SP3Q02447 781 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 TEPSINQ96N21 525 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 ELP3Q9H9T3 547 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 BRCA2P51587 3418 aa17.01■□□□□ 0.31
COMMD4-214ENST00000566230 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
COMMD4-214ENST00000566230 LDHAL6AQ6ZMR3 332 aa17■□□□□ 0.31
COMMD4-214ENST00000566230 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
COMMD4-214ENST00000566230 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
COMMD4-214ENST00000566230 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
COMMD4-214ENST00000566230 OPTNQ96CV9 577 aa17■□□□□ 0.31
COMMD4-214ENST00000566230 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
COMMD4-214ENST00000566230 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
COMMD4-214ENST00000566230 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
COMMD4-214ENST00000566230 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
COMMD4-214ENST00000566230 GYG1P46976 350 aa16.98■□□□□ 0.31
COMMD4-214ENST00000566230 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
COMMD4-214ENST00000566230 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms