RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 PPP1R12BO60237 982 aaPredicted RBP20.18■□□□□ 0.82
EDC3-210ENST00000566219 ITGA6P23229 1130 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
EDC3-210ENST00000566219 CRHR2Q13324 411 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 ANKRD2Q9GZV1 360 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
EDC3-210ENST00000566219 F8W031 263 aaPredicted RBP20.17■□□□□ 0.82
EDC3-210ENST00000566219 APAF1O14727 1248 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 GJA5P36382 358 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 MPHOSPH8Q99549 860 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 CD209Q9NNX6 404 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 PPP2R3BQ9Y5P8 575 aa20.17■□□□□ 0.82
EDC3-210ENST00000566219 EN2P19622 333 aaPredicted RBP20.16■□□□□ 0.82
EDC3-210ENST00000566219 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
EDC3-210ENST00000566219 SNAP23O00161 211 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 CAP1Q01518 475 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 CHRNDQ07001 517 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 ARMC5Q96C12 935 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 EFCC1Q9HA90 598 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 AOX1Q06278 1338 aa20.15■□□□□ 0.82
EDC3-210ENST00000566219 H7C1W4 665 aa20.14■□□□□ 0.81
EDC3-210ENST00000566219 MYO1BO43795 1136 aa20.14■□□□□ 0.81
EDC3-210ENST00000566219 NBPF12Q5TAG4 269 aaPredicted RBP20.14■□□□□ 0.81
EDC3-210ENST00000566219 MIER1Q8N108 512 aa20.14■□□□□ 0.81
EDC3-210ENST00000566219 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
EDC3-210ENST00000566219 IRS2Q9Y4H2 1338 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 SPDYE2BA6NHP3 402 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 SPDYE6P0CI01 402 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 IREB2P48200 963 aaKnown RBP20.13■□□□□ 0.81
EDC3-210ENST00000566219 FXR1P51114 621 aaKnown RBP eCLIP20.13■□□□□ 0.81
EDC3-210ENST00000566219 SUPT20HL1Q3ZLR7 823 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 OTUD7BQ6GQQ9 843 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 STK31Q9BXU1 1019 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 JAG2Q9Y219 1238 aa20.13■□□□□ 0.81
EDC3-210ENST00000566219 TAF5LO75529 589 aa20.12■□□□□ 0.81
EDC3-210ENST00000566219 SP3Q02447 781 aa20.12■□□□□ 0.81
EDC3-210ENST00000566219 G2E3Q7L622 706 aa20.12■□□□□ 0.81
EDC3-210ENST00000566219 PTPN18Q99952 460 aa20.12■□□□□ 0.81
EDC3-210ENST00000566219 ARAP2Q8WZ64 1704 aa20.11■□□□□ 0.81
EDC3-210ENST00000566219 GCKRQ14397 625 aa20.11■□□□□ 0.81
EDC3-210ENST00000566219 ANKRD13AQ8IZ07 590 aa20.11■□□□□ 0.81
EDC3-210ENST00000566219 HELBQ8NG08 1087 aaPredicted RBP20.11■□□□□ 0.81
EDC3-210ENST00000566219 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
EDC3-210ENST00000566219 PRMT6Q96LA8 375 aaPredicted RBP20.11■□□□□ 0.81
EDC3-210ENST00000566219 ELP3Q9H9T3 547 aa20.11■□□□□ 0.81
EDC3-210ENST00000566219 ZSWIM8A7E2V4 1837 aa20.11■□□□□ 0.81
EDC3-210ENST00000566219 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
EDC3-210ENST00000566219 USP2O75604 605 aaPredicted RBP20.1■□□□□ 0.81
EDC3-210ENST00000566219 RBM5P52756 815 aaKnown RBP eCLIP20.1■□□□□ 0.81
EDC3-210ENST00000566219 CASP7P55210 303 aa20.1■□□□□ 0.81
EDC3-210ENST00000566219 RASA3Q14644 834 aa20.1■□□□□ 0.81
EDC3-210ENST00000566219 OPTNQ96CV9 577 aa20.1■□□□□ 0.81
EDC3-210ENST00000566219 CSF1RP07333 972 aa20.09■□□□□ 0.81
EDC3-210ENST00000566219 ZNF804AQ7Z570 1209 aa20.09■□□□□ 0.81
EDC3-210ENST00000566219 ZNF333Q96JL9 665 aa20.09■□□□□ 0.81
EDC3-210ENST00000566219 TMEM106CQ9BVX2 250 aa20.09■□□□□ 0.81
EDC3-210ENST00000566219 ANKRD18BA2A2Z9 1011 aa20.08■□□□□ 0.81
EDC3-210ENST00000566219 TESPA1A2RU30 521 aaPredicted RBP20.08■□□□□ 0.81
EDC3-210ENST00000566219 SLC9C1Q4G0N8 1177 aa20.08■□□□□ 0.81
EDC3-210ENST00000566219 C15orf52Q6ZUT6 534 aaKnown RBP20.08■□□□□ 0.81
EDC3-210ENST00000566219 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
EDC3-210ENST00000566219 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
EDC3-210ENST00000566219 PTCH2Q9Y6C5 1203 aa20.08■□□□□ 0.81
EDC3-210ENST00000566219 IL1R1P14778 569 aa20.07■□□□□ 0.8
EDC3-210ENST00000566219 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
EDC3-210ENST00000566219 COLQQ9Y215 455 aaPredicted RBP20.07■□□□□ 0.8
EDC3-210ENST00000566219 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
EDC3-210ENST00000566219 MYCP01106 439 aaPredicted RBP20.06■□□□□ 0.8
EDC3-210ENST00000566219 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
EDC3-210ENST00000566219 FKBP1AP62942 108 aaKnown RBP20.06■□□□□ 0.8
EDC3-210ENST00000566219 TAF1CQ15572 869 aaPredicted RBP20.06■□□□□ 0.8
EDC3-210ENST00000566219 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
EDC3-210ENST00000566219 CDAN1Q8IWY9 1227 aa20.06■□□□□ 0.8
EDC3-210ENST00000566219 BRI3BPQ8WY22 251 aa20.06■□□□□ 0.8
EDC3-210ENST00000566219 CCL15-CCL14A0A0B4J2E2 113 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 FLIIQ13045 1269 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 FKBP5Q13451 457 aaPredicted RBP20.05■□□□□ 0.8
EDC3-210ENST00000566219 TNFAIP1Q13829 316 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 CCL15Q16663 113 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 SLC4A8Q2Y0W8 1093 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 MS4A4AQ96JQ5 239 aa20.05■□□□□ 0.8
EDC3-210ENST00000566219 CEP290O15078 2479 aa20.04■□□□□ 0.8
EDC3-210ENST00000566219 IFIT5Q13325 482 aaKnown RBP20.04■□□□□ 0.8
EDC3-210ENST00000566219 SPDYE2Q495Y8 402 aa20.04■□□□□ 0.8
EDC3-210ENST00000566219 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
EDC3-210ENST00000566219 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
EDC3-210ENST00000566219 ZFYVE28Q9HCC9 887 aa20.04■□□□□ 0.8
EDC3-210ENST00000566219 ZNF70Q9UC06 446 aaPredicted RBP20.04■□□□□ 0.8
EDC3-210ENST00000566219 TRIOBPQ9H2D6 2365 aa20.03■□□□□ 0.8
EDC3-210ENST00000566219 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
EDC3-210ENST00000566219 NBPF11Q86T75 865 aa20.03■□□□□ 0.8
EDC3-210ENST00000566219 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
EDC3-210ENST00000566219 TDRD3Q9H7E2 651 aaKnown RBP20.03■□□□□ 0.8
EDC3-210ENST00000566219 PLIN1O60240 522 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms