RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 VPS72Q15906 364 aa23.04■■□□□ 1.28
CDH5-204ENST00000563425 ZNF274Q96GC6 653 aaPredicted RBP23.04■■□□□ 1.28
CDH5-204ENST00000563425 TSPY26PQ9H489 355 aa23.04■■□□□ 1.28
CDH5-204ENST00000563425 RRAGDQ9NQL2 400 aaPredicted RBP23.04■■□□□ 1.28
CDH5-204ENST00000563425 ELP1O95163 1332 aa23.03■■□□□ 1.28
CDH5-204ENST00000563425 CHD4Q14839 1912 aa23.03■■□□□ 1.28
CDH5-204ENST00000563425 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
CDH5-204ENST00000563425 CLEC4GQ6UXB4 293 aa23.03■■□□□ 1.28
CDH5-204ENST00000563425 NSUN7Q8NE18 718 aaKnown RBP23.03■■□□□ 1.28
CDH5-204ENST00000563425 EVCP57679 992 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 HAND2P61296 217 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 IDH1O75874 414 aaKnown RBP23.02■■□□□ 1.28
CDH5-204ENST00000563425 LETM1O95202 739 aaPredicted RBP23.02■■□□□ 1.28
CDH5-204ENST00000563425 CTDNEP1O95476 244 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 CHST3Q7LGC8 479 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 BTAF1O14981 1849 aa23.02■■□□□ 1.28
CDH5-204ENST00000563425 PDE6AP16499 860 aa23.01■■□□□ 1.27
CDH5-204ENST00000563425 PDIA3P30101 505 aaKnown RBP23.01■■□□□ 1.27
CDH5-204ENST00000563425 IGHMBP2P38935 993 aaKnown RBP23.01■■□□□ 1.27
CDH5-204ENST00000563425 HMGN5P82970 282 aaKnown RBP23.01■■□□□ 1.27
CDH5-204ENST00000563425 TTC6Q86TZ1 520 aa23.01■■□□□ 1.27
CDH5-204ENST00000563425 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
CDH5-204ENST00000563425 TRIM44Q96DX7 344 aaPredicted RBP23.01■■□□□ 1.27
CDH5-204ENST00000563425 DDX11Q96FC9 970 aa23.01■■□□□ 1.27
CDH5-204ENST00000563425 TCRBV5S4A2TA0A5A2 114 aa23■■□□□ 1.27
CDH5-204ENST00000563425 FAM173BQ6P4H8 233 aa23■■□□□ 1.27
CDH5-204ENST00000563425 MB21D2Q8IYB1 491 aaPredicted RBP23■■□□□ 1.27
CDH5-204ENST00000563425 CHMP4CQ96CF2 233 aa23■■□□□ 1.27
CDH5-204ENST00000563425 NGLY1Q96IV0 654 aa23■■□□□ 1.27
CDH5-204ENST00000563425 C8orf37Q96NL8 207 aa23■■□□□ 1.27
CDH5-204ENST00000563425 ZNF532Q9HCE3 1301 aa23■■□□□ 1.27
CDH5-204ENST00000563425 TAF1P21675 1872 aa23■■□□□ 1.27
CDH5-204ENST00000563425 ZNF213O14771 459 aa23■■□□□ 1.27
CDH5-204ENST00000563425 KLHL34Q8N239 644 aa23■■□□□ 1.27
CDH5-204ENST00000563425 FAM184AQ8NB25 1140 aa23■■□□□ 1.27
CDH5-204ENST00000563425 SCAND2PQ9GZW5 306 aaPredicted RBP23■■□□□ 1.27
CDH5-204ENST00000563425 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
CDH5-204ENST00000563425 SALL1Q9NSC2 1324 aa23■■□□□ 1.27
CDH5-204ENST00000563425 COL4A1P02462 1669 aa23■■□□□ 1.27
CDH5-204ENST00000563425 MCM5P33992 734 aa22.99■■□□□ 1.27
CDH5-204ENST00000563425 RESTQ13127 1097 aa22.99■■□□□ 1.27
CDH5-204ENST00000563425 NCOA7Q8NI08 942 aa22.99■■□□□ 1.27
CDH5-204ENST00000563425 WDR19Q8NEZ3 1342 aa22.99■■□□□ 1.27
CDH5-204ENST00000563425 PTPDC1A2A3K4 754 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 H3BQV1 296 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 SNAP23O00161 211 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 CCT2P78371 535 aaKnown RBP22.98■■□□□ 1.27
CDH5-204ENST00000563425 RASGRF1Q13972 1273 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 IFFO2Q5TF58 517 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 KIF3AQ9Y496 699 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 CNTNAP4Q9C0A0 1308 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 RGL2O15211 777 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 NAA16Q6N069 864 aaPredicted RBP22.98■■□□□ 1.27
CDH5-204ENST00000563425 PDLIM2Q96JY6 352 aa22.98■■□□□ 1.27
CDH5-204ENST00000563425 ZSCAN16Q9H4T2 348 aaPredicted RBP22.98■■□□□ 1.27
CDH5-204ENST00000563425 NHSQ6T4R5 1651 aa22.97■■□□□ 1.27
CDH5-204ENST00000563425 PRC1O43663 620 aa22.97■■□□□ 1.27
CDH5-204ENST00000563425 TPRNQ4KMQ1 711 aa22.97■■□□□ 1.27
CDH5-204ENST00000563425 NCOA5Q9HCD5 579 aaKnown RBP22.97■■□□□ 1.27
CDH5-204ENST00000563425 THSD7AQ9UPZ6 1657 aa22.97■■□□□ 1.27
CDH5-204ENST00000563425 FNBP4Q8N3X1 1017 aaPredicted RBP22.96■■□□□ 1.27
CDH5-204ENST00000563425 NBPF3Q9H094 633 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 UBAP1LF5GYI3 381 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 ANTXR2P58335 489 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 CHRNDQ07001 517 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 RALYLQ86SE5 291 aaKnown RBP22.96■■□□□ 1.27
CDH5-204ENST00000563425 STRBPQ96SI9 672 aaKnown RBP22.96■■□□□ 1.27
CDH5-204ENST00000563425 GPHNQ9NQX3 736 aaPredicted RBP22.96■■□□□ 1.27
CDH5-204ENST00000563425 NAP1L2Q9ULW6 460 aaPredicted RBP22.96■■□□□ 1.27
CDH5-204ENST00000563425 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
CDH5-204ENST00000563425 COL24A1Q17RW2 1714 aa22.95■■□□□ 1.26
CDH5-204ENST00000563425 MAP3K12Q12852 859 aa22.95■■□□□ 1.26
CDH5-204ENST00000563425 LEO1Q8WVC0 666 aaPredicted RBP22.95■■□□□ 1.26
CDH5-204ENST00000563425 SPATA32Q96LK8 384 aa22.95■■□□□ 1.26
CDH5-204ENST00000563425 CDC5LQ99459 802 aaKnown RBP22.95■■□□□ 1.26
CDH5-204ENST00000563425 TFIP11Q9UBB9 837 aaKnown RBP22.95■■□□□ 1.26
CDH5-204ENST00000563425 ESPNB1AK53 854 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 ERFEQ4G0M1 354 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 RNF214Q8ND24 703 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 ZMYM6O95789 1325 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 SF3B3Q15393 1217 aaKnown RBP22.94■■□□□ 1.26
CDH5-204ENST00000563425 ALX1Q15699 326 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 AIDAQ96BJ3 306 aa22.94■■□□□ 1.26
CDH5-204ENST00000563425 BCAMP50895 628 aa22.93■■□□□ 1.26
CDH5-204ENST00000563425 KCNQ4P56696 695 aa22.93■■□□□ 1.26
CDH5-204ENST00000563425 MAGEB6Q8N7X4 407 aa22.93■■□□□ 1.26
CDH5-204ENST00000563425 APPP05067 770 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
CDH5-204ENST00000563425 PTF1AQ7RTS3 328 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 TBC1D10CQ8IV04 446 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 CARMIL3Q8ND23 1372 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 TRDNQ13061 729 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 HPS5Q9UPZ3 1129 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 TIAM2Q8IVF5 1701 aa22.92■■□□□ 1.26
CDH5-204ENST00000563425 LY75O60449 1722 aa22.91■■□□□ 1.26
CDH5-204ENST00000563425 KLF18A0A0U1RQI7 1052 aa22.91■■□□□ 1.26
CDH5-204ENST00000563425 C3orf67Q6ZVT6 689 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms