RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 AOX1Q06278 1338 aa19.68■□□□□ 0.74
USB1-208ENST00000563207 F8W031 263 aaPredicted RBP19.67■□□□□ 0.74
USB1-208ENST00000563207 UBE2Q2LH0YL09 131 aa19.67■□□□□ 0.74
USB1-208ENST00000563207 ZKSCAN2Q63HK3 967 aa19.67■□□□□ 0.74
USB1-208ENST00000563207 FZD1Q9UP38 647 aa19.67■□□□□ 0.74
USB1-208ENST00000563207 PITPNM2Q9BZ72 1349 aa19.67■□□□□ 0.74
USB1-208ENST00000563207 SLC10A3P09131 477 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 TAF7LQ5H9L4 462 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
USB1-208ENST00000563207 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 FRAT1Q92837 279 aaPredicted RBP19.66■□□□□ 0.74
USB1-208ENST00000563207 ABHD8Q96I13 439 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 ZBED3Q96IU2 234 aaPredicted RBP19.66■□□□□ 0.74
USB1-208ENST00000563207 BICC1Q9H694 974 aaKnown RBP19.66■□□□□ 0.74
USB1-208ENST00000563207 CNNM1Q9NRU3 951 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 MYO3BQ8WXR4 1341 aa19.66■□□□□ 0.74
USB1-208ENST00000563207 PAPPA2Q9BXP8 1791 aa19.65■□□□□ 0.74
USB1-208ENST00000563207 MS4A1P11836 297 aa19.65■□□□□ 0.74
USB1-208ENST00000563207 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
USB1-208ENST00000563207 UTYO14607 1347 aa19.65■□□□□ 0.74
USB1-208ENST00000563207 IL1R1P14778 569 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 GYG1P46976 350 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 PRKG1Q13976 671 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 RASAL3Q86YV0 1011 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
USB1-208ENST00000563207 KLHDC4Q8TBB5 520 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 CSRNP1Q96S65 589 aa19.64■□□□□ 0.73
USB1-208ENST00000563207 TRIM27P14373 513 aa19.63■□□□□ 0.73
USB1-208ENST00000563207 LRRC24Q50LG9 513 aa19.63■□□□□ 0.73
USB1-208ENST00000563207 RNF186Q9NXI6 227 aa19.63■□□□□ 0.73
USB1-208ENST00000563207 RIPOR2Q9Y4F9 1068 aa19.63■□□□□ 0.73
USB1-208ENST00000563207 TRPA1O75762 1119 aa19.62■□□□□ 0.73
USB1-208ENST00000563207 INTS3Q68E01 1043 aaKnown RBP19.62■□□□□ 0.73
USB1-208ENST00000563207 ZNF804AQ7Z570 1209 aa19.62■□□□□ 0.73
USB1-208ENST00000563207 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
USB1-208ENST00000563207 CA12O43570 354 aa19.61■□□□□ 0.73
USB1-208ENST00000563207 RABL6Q3YEC7 729 aaPredicted RBP19.61■□□□□ 0.73
USB1-208ENST00000563207 PRMT6Q96LA8 375 aaPredicted RBP19.61■□□□□ 0.73
USB1-208ENST00000563207 USP44Q9H0E7 712 aa19.61■□□□□ 0.73
USB1-208ENST00000563207 CLRN2A0PK11 232 aa19.6■□□□□ 0.73
USB1-208ENST00000563207 MKRN3Q13064 507 aaKnown RBP19.6■□□□□ 0.73
USB1-208ENST00000563207 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
USB1-208ENST00000563207 GRIK5Q16478 980 aa19.6■□□□□ 0.73
USB1-208ENST00000563207 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
USB1-208ENST00000563207 HDAC9Q9UKV0 1011 aa19.6■□□□□ 0.73
USB1-208ENST00000563207 IQSEC3Q9UPP2 1182 aaPredicted RBP19.6■□□□□ 0.73
USB1-208ENST00000563207 ECM29Q5VYK3 1845 aa19.6■□□□□ 0.73
USB1-208ENST00000563207 PTPN12Q05209 780 aaKnown RBP19.59■□□□□ 0.73
USB1-208ENST00000563207 DLGAP5Q15398 846 aa19.59■□□□□ 0.73
USB1-208ENST00000563207 CFAP100Q494V2 611 aa19.59■□□□□ 0.73
USB1-208ENST00000563207 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
USB1-208ENST00000563207 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
USB1-208ENST00000563207 MCOLN1Q9GZU1 580 aa19.59■□□□□ 0.73
USB1-208ENST00000563207 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.59■□□□□ 0.73
USB1-208ENST00000563207 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
USB1-208ENST00000563207 FKBP1BP68106 108 aa19.58■□□□□ 0.72
USB1-208ENST00000563207 TDRD7Q8NHU6 1098 aaKnown RBP19.58■□□□□ 0.72
USB1-208ENST00000563207 SSC5DA1L4H1 1573 aa19.57■□□□□ 0.72
USB1-208ENST00000563207 CCDC85CA6NKD9 419 aa19.57■□□□□ 0.72
USB1-208ENST00000563207 UBE4AQ14139 1066 aa19.57■□□□□ 0.72
USB1-208ENST00000563207 DEFB129Q9H1M3 183 aa19.57■□□□□ 0.72
USB1-208ENST00000563207 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
USB1-208ENST00000563207 DGKZQ13574 1117 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
USB1-208ENST00000563207 VGLL2Q8N8G2 317 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 MTMR14Q8NCE2 650 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 CLUAP1Q96AJ1 413 aa19.56■□□□□ 0.72
USB1-208ENST00000563207 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
USB1-208ENST00000563207 RBM5P52756 815 aaKnown RBP eCLIP19.55■□□□□ 0.72
USB1-208ENST00000563207 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
USB1-208ENST00000563207 MFSD14BQ5SR56 506 aa19.55■□□□□ 0.72
USB1-208ENST00000563207 ANGEL1Q9UNK9 670 aaKnown RBP19.55■□□□□ 0.72
USB1-208ENST00000563207 GNAI3P08754 354 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
USB1-208ENST00000563207 MMP14P50281 582 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 FKBP1AP62942 108 aaKnown RBP19.54■□□□□ 0.72
USB1-208ENST00000563207 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 NBPF12Q5TAG4 269 aaPredicted RBP19.54■□□□□ 0.72
USB1-208ENST00000563207 FBXO33Q7Z6M2 555 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 CDAN1Q8IWY9 1227 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 TMEM57Q8N5G2 664 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 VEZTQ9HBM0 779 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 SAGE1Q9NXZ1 904 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 ARAP2Q8WZ64 1704 aa19.54■□□□□ 0.72
USB1-208ENST00000563207 MROH5Q6ZUA9 1318 aa19.53■□□□□ 0.72
USB1-208ENST00000563207 TBC1D8O95759 1140 aa19.53■□□□□ 0.72
USB1-208ENST00000563207 BCAMP50895 628 aa19.53■□□□□ 0.72
USB1-208ENST00000563207 CHAF1AQ13111 956 aaPredicted RBP19.53■□□□□ 0.72
USB1-208ENST00000563207 LDLRAD1Q5T700 205 aa19.53■□□□□ 0.72
USB1-208ENST00000563207 CLMNQ96JQ2 1002 aa19.53■□□□□ 0.72
USB1-208ENST00000563207 TTF2Q9UNY4 1162 aaKnown RBP19.53■□□□□ 0.72
USB1-208ENST00000563207 PDE8BO95263 885 aa19.52■□□□□ 0.72
USB1-208ENST00000563207 NF2P35240 595 aa19.52■□□□□ 0.72
USB1-208ENST00000563207 R3HDMLQ9H3Y0 253 aa19.52■□□□□ 0.72
USB1-208ENST00000563207 TDRD3Q9H7E2 651 aaKnown RBP19.52■□□□□ 0.72
USB1-208ENST00000563207 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
USB1-208ENST00000563207 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms