RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 TFCP2Q12800 502 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 NAA16Q6N069 864 aaPredicted RBP10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 PALD1Q9ULE6 856 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 FKBP4Q02790 459 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 ARHGAP29Q52LW3 1261 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 MTX1Q13505 466 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 BRAPQ7Z569 592 aa10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
CLUHP3-206ENST00000562354 TXLNAP40222 546 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 TCIRG1Q13488 830 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 MCMDC2Q4G0Z9 681 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 CTR9Q6PD62 1173 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 AOPEPQ8N6M6 819 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 ZNHIT6Q9NWK9 470 aaKnown RBP10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 TUBB2AQ13885 445 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 LDHAL6AQ6ZMR3 332 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 TUBB2BQ9BVA1 445 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 RGPD1P0DJD0 1748 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 CCDC148Q8NFR7 591 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 FAM89AQ96GI7 184 aa10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
CLUHP3-206ENST00000562354 SLC27A2O14975 620 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 PDIA6Q15084 440 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 COL5A2P05997 1499 aaPredicted RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 TNNI3KQ59H18 835 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 CCDC102BQ68D86 513 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 Q6ZUG5 572 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 DEF6Q9H4E7 631 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 FPGT-TNNI3KV9GXZ4 949 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 UBASH3AP57075 661 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 BICDL1Q6ZP65 573 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 EAF2Q96CJ1 260 aaPredicted RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 LSG1Q9H089 658 aaKnown RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 COPRSQ9NQ92 184 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 MAGEC2Q9UBF1 373 aaPredicted RBP10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 DNAI1Q9UI46 699 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
CLUHP3-206ENST00000562354 PLEKHG2Q9H7P9 1386 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 EYA2O00167 538 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 GOLIM4O00461 696 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 IGHMBP2P38935 993 aaKnown RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 STIM1Q13586 685 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 VPS37DQ86XT2 251 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 C17orf53Q8N3J3 647 aaPredicted RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 CNNM3Q8NE01 707 aa10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 PYM1Q9BRP8 204 aaKnown RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 VIRMAQ69YN4 1812 aaKnown RBP10.46□□□□□ -0.73
CLUHP3-206ENST00000562354 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 IRS4O14654 1257 aaPredicted RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 FAM177A1Q8N128 213 aaPredicted RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 CEP112Q8N8E3 955 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 NACAP1Q9BZK3 213 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 ORC3Q9UBD5 711 aaPredicted RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 THRAP3Q9Y2W1 955 aaKnown RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 NBPF26B4DH59 902 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 SYKP43405 635 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 GNG11P61952 73 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 NBPF14Q5TI25 921 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 NBPF15Q8N660 670 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 GOLGA1Q92805 767 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 ATG3Q9NT62 314 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.74
CLUHP3-206ENST00000562354 ATP8B1O43520 1251 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 SPTLC2O15270 562 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 POLR3GO15318 223 aaPredicted RBP10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 LUC7LQ9NQ29 371 aaKnown RBP10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 DBNDD2Q9BQY9 259 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 ZBTB1Q9Y2K1 713 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 MAP3K15Q6ZN16 1313 aa10.45□□□□□ -0.74
CLUHP3-206ENST00000562354 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 TTC6Q86TZ1 520 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 ZNF594Q96JF6 807 aaPredicted RBP10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 PTPDC1A2A3K4 754 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 ZPR1O75312 459 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 EPHA10Q5JZY3 1008 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 CTAGE1Q96RT6 745 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 CRACR2AQ9BSW2 395 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 MRVI1Q9Y6F6 885 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 ATP2B3Q16720 1220 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 ME3Q16798 604 aa10.44□□□□□ -0.74
CLUHP3-206ENST00000562354 GIGYF2Q6Y7W6 1299 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms