RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 PAXIP1Q6ZW49 1069 aaPredicted RBP23.24■■□□□ 1.31
PKD1-223ENST00000561668 TDRD7Q8NHU6 1098 aaKnown RBP23.24■■□□□ 1.31
PKD1-223ENST00000561668 CNTNAP1P78357 1384 aa23.24■■□□□ 1.31
PKD1-223ENST00000561668 A0A1B0GUL6 1792 aa23.23■■□□□ 1.31
PKD1-223ENST00000561668 SRGAP3O43295 1099 aa23.23■■□□□ 1.31
PKD1-223ENST00000561668 FKBP1AP62942 108 aaKnown RBP23.23■■□□□ 1.31
PKD1-223ENST00000561668 VGLL2Q8N8G2 317 aa23.23■■□□□ 1.31
PKD1-223ENST00000561668 RASSF10A6NK89 507 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 SLC5A1P13866 664 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
PKD1-223ENST00000561668 MVPQ14764 893 aaKnown RBP23.22■■□□□ 1.31
PKD1-223ENST00000561668 FBXO33Q7Z6M2 555 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 LPIN2Q92539 896 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 JAG2Q9Y219 1238 aa23.22■■□□□ 1.31
PKD1-223ENST00000561668 F8W031 263 aaPredicted RBP23.21■■□□□ 1.31
PKD1-223ENST00000561668 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
PKD1-223ENST00000561668 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
PKD1-223ENST00000561668 ATG9AQ7Z3C6 839 aa23.21■■□□□ 1.31
PKD1-223ENST00000561668 TLL2Q9Y6L7 1015 aa23.21■■□□□ 1.31
PKD1-223ENST00000561668 TRPM7Q96QT4 1865 aa23.21■■□□□ 1.31
PKD1-223ENST00000561668 ASTN2O75129 1339 aaPredicted RBP23.2■■□□□ 1.3
PKD1-223ENST00000561668 FAM205AQ6ZU69 1335 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 PITPNM2Q9BZ72 1349 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 ADM5C9JUS6 153 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 WNT10BO00744 389 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 ECE1P42892 770 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 VEGFBP49765 207 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 C2orf69Q8N8R5 385 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
PKD1-223ENST00000561668 RBM5P52756 815 aaKnown RBP eCLIP23.19■■□□□ 1.3
PKD1-223ENST00000561668 MFSD14BQ5SR56 506 aa23.19■■□□□ 1.3
PKD1-223ENST00000561668 CERS5Q8N5B7 392 aa23.19■■□□□ 1.3
PKD1-223ENST00000561668 PA2G4Q9UQ80 394 aaKnown RBP23.19■■□□□ 1.3
PKD1-223ENST00000561668 POLR2AP24928 1970 aaKnown RBP23.18■■□□□ 1.3
PKD1-223ENST00000561668 MYO1BO43795 1136 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 FGFR2P21802 821 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 BCAMP50895 628 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 C20orf194Q5TEA3 1177 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 SAPCD2Q86UD0 394 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
PKD1-223ENST00000561668 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
PKD1-223ENST00000561668 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
PKD1-223ENST00000561668 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
PKD1-223ENST00000561668 GRM1Q13255 1194 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 POLA2Q14181 598 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 DLK2Q6UY11 383 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 TBC1D22AQ8WUA7 517 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 GNL3LQ9NVN8 582 aaKnown RBP23.17■■□□□ 1.3
PKD1-223ENST00000561668 COG6Q9Y2V7 657 aa23.17■■□□□ 1.3
PKD1-223ENST00000561668 SSH3Q8TE77 659 aa23.16■■□□□ 1.3
PKD1-223ENST00000561668 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
PKD1-223ENST00000561668 GBA2Q9HCG7 927 aaPredicted RBP23.16■■□□□ 1.3
PKD1-223ENST00000561668 TTF2Q9UNY4 1162 aaKnown RBP23.16■■□□□ 1.3
PKD1-223ENST00000561668 AKAP2Q9Y2D5 859 aa23.16■■□□□ 1.3
PKD1-223ENST00000561668 PNMA6EA0A0J9YXQ4 647 aa23.15■■□□□ 1.3
PKD1-223ENST00000561668 RRP1P56182 461 aaKnown RBP23.15■■□□□ 1.3
PKD1-223ENST00000561668 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.3
PKD1-223ENST00000561668 CFAP100Q494V2 611 aa23.15■■□□□ 1.3
PKD1-223ENST00000561668 CDCA5Q96FF9 252 aa23.15■■□□□ 1.3
PKD1-223ENST00000561668 HHIPL1Q96JK4 782 aa23.15■■□□□ 1.3
PKD1-223ENST00000561668 CAPNS2Q96L46 248 aa23.15■■□□□ 1.3
PKD1-223ENST00000561668 HUNKP57058 714 aa23.14■■□□□ 1.29
PKD1-223ENST00000561668 APOBEC3FQ8IUX4 373 aaKnown RBP23.14■■□□□ 1.29
PKD1-223ENST00000561668 MTMR14Q8NCE2 650 aa23.14■■□□□ 1.29
PKD1-223ENST00000561668 NF2P35240 595 aa23.13■■□□□ 1.29
PKD1-223ENST00000561668 CYP4F22Q6NT55 531 aa23.13■■□□□ 1.29
PKD1-223ENST00000561668 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
PKD1-223ENST00000561668 HSPA1AP0DMV8 641 aaKnown RBP23.12■■□□□ 1.29
PKD1-223ENST00000561668 HSPA1BP0DMV9 641 aaKnown RBP23.12■■□□□ 1.29
PKD1-223ENST00000561668 CEP85Q6P2H3 762 aa23.12■■□□□ 1.29
PKD1-223ENST00000561668 AIDAQ96BJ3 306 aa23.12■■□□□ 1.29
PKD1-223ENST00000561668 SERPINA10Q9UK55 444 aa23.12■■□□□ 1.29
PKD1-223ENST00000561668 SCAF8Q9UPN6 1271 aaKnown RBP23.12■■□□□ 1.29
PKD1-223ENST00000561668 MAP2K1Q02750 393 aaPredicted RBP23.11■■□□□ 1.29
PKD1-223ENST00000561668 WDR66Q8TBY9 1149 aa23.11■■□□□ 1.29
PKD1-223ENST00000561668 ZBED3Q96IU2 234 aaPredicted RBP23.11■■□□□ 1.29
PKD1-223ENST00000561668 PRMT6Q96LA8 375 aaPredicted RBP23.11■■□□□ 1.29
PKD1-223ENST00000561668 SPDYE2BA6NHP3 402 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 SPDYE6P0CI01 402 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 TIMM10P62072 90 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 TFCP2Q12800 502 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 RPAP2Q8IXW5 612 aaPredicted RBP23.1■■□□□ 1.29
PKD1-223ENST00000561668 NEUROD6Q96NK8 337 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 BEGAINQ9BUH8 593 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 C1orf115Q9H7X2 142 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 NOP58Q9Y2X3 529 aaKnown RBP23.1■■□□□ 1.29
PKD1-223ENST00000561668 SUGT1Q9Y2Z0 365 aa23.1■■□□□ 1.29
PKD1-223ENST00000561668 ZBTB22O15209 634 aa23.09■■□□□ 1.29
PKD1-223ENST00000561668 MAP2K2P36507 400 aa23.09■■□□□ 1.29
PKD1-223ENST00000561668 FKBP1BP68106 108 aa23.09■■□□□ 1.29
PKD1-223ENST00000561668 OS9Q13438 667 aaPredicted RBP23.09■■□□□ 1.29
PKD1-223ENST00000561668 TTLL12Q14166 644 aaPredicted RBP23.09■■□□□ 1.29
PKD1-223ENST00000561668 HDLBPQ00341 1268 aaKnown RBP23.08■■□□□ 1.29
PKD1-223ENST00000561668 GORABQ5T7V8 394 aa23.08■■□□□ 1.29
PKD1-223ENST00000561668 PRAMEF18Q5VWM3 479 aa23.08■■□□□ 1.29
PKD1-223ENST00000561668 RGMBQ6NW40 437 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms