RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RNF223E7ERA6 249 aa7.23□□□□□ -1.25
HERC1-213ENST00000561359 KDM4AO75164 1064 aa7.23□□□□□ -1.25
HERC1-213ENST00000561359 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
HERC1-213ENST00000561359 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
HERC1-213ENST00000561359 RASAL3Q86YV0 1011 aa7.23□□□□□ -1.25
HERC1-213ENST00000561359 SNED1Q8TER0 1413 aa7.23□□□□□ -1.25
HERC1-213ENST00000561359 SCN7AQ01118 1682 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 HEG1Q9ULI3 1381 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 PIP4K2AP48426 406 aaPredicted RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 NUTM1Q86Y26 1132 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 VPS33BQ9H267 617 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 TRIM17Q9Y577 477 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 V9GY48 417 aaPredicted RBP7.22□□□□□ -1.25
HERC1-213ENST00000561359 SCN11AQ9UI33 1791 aa7.22□□□□□ -1.25
HERC1-213ENST00000561359 USP46P62068 366 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 CRY2Q49AN0 593 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 ZNF790Q6PG37 636 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 SUPT20HQ8NEM7 779 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 RBM17Q96I25 401 aaKnown RBP7.21□□□□□ -1.26
HERC1-213ENST00000561359 MRC1P22897 1456 aa7.21□□□□□ -1.26
HERC1-213ENST00000561359 PRAMEF22A3QJZ6 481 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 EGFRP00533 1210 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
HERC1-213ENST00000561359 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
HERC1-213ENST00000561359 SLC19A1P41440 591 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 TEFQ10587 303 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 Q3C1V9 767 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 OTOP1Q7RTM1 612 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 CDCA5Q96FF9 252 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 FMNL2Q96PY5 1086 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 NYXQ9GZU5 481 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 R3HDMLQ9H3Y0 253 aa7.2□□□□□ -1.26
HERC1-213ENST00000561359 UNC80Q8N2C7 3258 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 TM4SF4P48230 202 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 KIAA2012Q0VF49 1180 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 SLC4A8Q2Y0W8 1093 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 DPP8Q6V1X1 898 aaPredicted RBP7.19□□□□□ -1.26
HERC1-213ENST00000561359 DPF2Q92785 391 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 REPIN1Q9BWE0 567 aaKnown RBP7.19□□□□□ -1.26
HERC1-213ENST00000561359 GGA3Q9NZ52 723 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 KIF7Q2M1P5 1343 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 ABCC12Q96J65 1359 aa7.19□□□□□ -1.26
HERC1-213ENST00000561359 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 YDJCA8MPS7 323 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 UBE2Q2LH0YL09 131 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 GFRA3O60609 400 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 FKBP1BP68106 108 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 SREBF2Q12772 1141 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 AMHR2Q16671 573 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 MTHFSDQ2M296 383 aaKnown RBP7.18□□□□□ -1.26
HERC1-213ENST00000561359 GIGYF2Q6Y7W6 1299 aaKnown RBP7.18□□□□□ -1.26
HERC1-213ENST00000561359 DPF3Q92784 378 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 ARMC5Q96C12 935 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 THAP11Q96EK4 314 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 COL25A1Q9BXS0 654 aaPredicted RBP7.18□□□□□ -1.26
HERC1-213ENST00000561359 RTFDC1Q9BY42 306 aaPredicted RBP7.18□□□□□ -1.26
HERC1-213ENST00000561359 SALL2Q9Y467 1007 aaPredicted RBP7.18□□□□□ -1.26
HERC1-213ENST00000561359 ATP6V0A2Q9Y487 856 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 USP16Q9Y5T5 823 aa7.18□□□□□ -1.26
HERC1-213ENST00000561359 PSMD14O00487 310 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 TRIM66O15016 1216 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 HOXA2O43364 376 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 HMOX1P09601 288 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 IL13P35225 146 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 HLFQ16534 295 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 KIF4BQ2VIQ3 1234 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 RNF19BQ6ZMZ0 732 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 MOB2Q70IA6 237 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 MPNDQ8N594 471 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 PTPN22Q9Y2R2 807 aa7.17□□□□□ -1.26
HERC1-213ENST00000561359 ALDH1A1P00352 501 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
HERC1-213ENST00000561359 RPS12P25398 132 aaKnown RBP7.16□□□□□ -1.26
HERC1-213ENST00000561359 Q6ZNB5 142 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 FAM160A2Q8N612 972 aaPredicted RBP7.16□□□□□ -1.26
HERC1-213ENST00000561359 HLA-CQ95604 372 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 ERO1AQ96HE7 468 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 POLR3GLQ9BT43 218 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 CFHR5Q9BXR6 569 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 EFCC1Q9HA90 598 aa7.16□□□□□ -1.26
HERC1-213ENST00000561359 ASTN2O75129 1339 aaPredicted RBP7.16□□□□□ -1.26
HERC1-213ENST00000561359 VCANP13611 3396 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 KCNQ3O43525 872 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 GPTP24298 496 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 GUCA2AQ02747 115 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 TCIRG1Q13488 830 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 SLC9C1Q4G0N8 1177 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 ANGEL2Q5VTE6 544 aaKnown RBP7.15□□□□□ -1.26
HERC1-213ENST00000561359 NBPF11Q86T75 865 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 NGEFQ8N5V2 710 aa7.15□□□□□ -1.26
HERC1-213ENST00000561359 CD99L2Q8TCZ2 262 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms