RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CERS5Q8N5B7 392 aa24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 MYOZ2Q9NPC6 264 aa24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 G3BP1Q13283 466 aaKnown RBP eCLIP24.68■■□□□ 1.54
TSPAN3-210ENST00000561277 SSH3Q8TE77 659 aa24.68■■□□□ 1.54
TSPAN3-210ENST00000561277 PASKQ96RG2 1323 aa24.68■■□□□ 1.54
TSPAN3-210ENST00000561277 ZC3H15Q8WU90 426 aaKnown RBP24.67■■□□□ 1.54
TSPAN3-210ENST00000561277 CHAF1AQ13111 956 aaPredicted RBP24.67■■□□□ 1.54
TSPAN3-210ENST00000561277 OS9Q13438 667 aaPredicted RBP24.67■■□□□ 1.54
TSPAN3-210ENST00000561277 FAM205AQ6ZU69 1335 aa24.66■■□□□ 1.54
TSPAN3-210ENST00000561277 F8W031 263 aaPredicted RBP24.66■■□□□ 1.54
TSPAN3-210ENST00000561277 ZBTB40Q9NUA8 1239 aa24.66■■□□□ 1.54
TSPAN3-210ENST00000561277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.66■■□□□ 1.54
TSPAN3-210ENST00000561277 ASTN2O75129 1339 aaPredicted RBP24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 TRAF5O00463 557 aa24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 SURF6O75683 361 aaKnown RBP24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 FMR1Q06787 632 aaKnown RBP eCLIP24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 MFSD14BQ5SR56 506 aa24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 GLIS2Q9BZE0 524 aaPredicted RBP24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 PGAP2Q9UHJ9 254 aa24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 HDAC9Q9UKV0 1011 aa24.65■■□□□ 1.54
TSPAN3-210ENST00000561277 ADORA1P30542 326 aa24.64■■□□□ 1.54
TSPAN3-210ENST00000561277 RRP1P56182 461 aaKnown RBP24.64■■□□□ 1.54
TSPAN3-210ENST00000561277 CHMP4BQ9H444 224 aaKnown RBP24.64■■□□□ 1.54
TSPAN3-210ENST00000561277 GGA3Q9NZ52 723 aa24.64■■□□□ 1.54
TSPAN3-210ENST00000561277 ARAP2Q8WZ64 1704 aa24.64■■□□□ 1.53
TSPAN3-210ENST00000561277 A0A1B0GUL7 405 aa24.63■■□□□ 1.53
TSPAN3-210ENST00000561277 TIMM10P62072 90 aa24.63■■□□□ 1.53
TSPAN3-210ENST00000561277 FKBP1AP62942 108 aaKnown RBP24.63■■□□□ 1.53
TSPAN3-210ENST00000561277 AKAP2Q9Y2D5 859 aa24.63■■□□□ 1.53
TSPAN3-210ENST00000561277 SCARF1Q14162 830 aa24.63■■□□□ 1.53
TSPAN3-210ENST00000561277 DCPSQ96C86 337 aaKnown RBP24.62■■□□□ 1.53
TSPAN3-210ENST00000561277 MYH13Q9UKX3 1938 aa24.62■■□□□ 1.53
TSPAN3-210ENST00000561277 PHKA1P46020 1223 aa24.61■■□□□ 1.53
TSPAN3-210ENST00000561277 NBPF9Q3BBW0 867 aa24.61■■□□□ 1.53
TSPAN3-210ENST00000561277 ANGEL2Q5VTE6 544 aaKnown RBP24.61■■□□□ 1.53
TSPAN3-210ENST00000561277 CDC37L1Q7L3B6 337 aa24.61■■□□□ 1.53
TSPAN3-210ENST00000561277 NEUROD6Q96NK8 337 aa24.61■■□□□ 1.53
TSPAN3-210ENST00000561277 KRT26Q7Z3Y9 468 aa24.6■■□□□ 1.53
TSPAN3-210ENST00000561277 USP48Q86UV5 1035 aa24.6■■□□□ 1.53
TSPAN3-210ENST00000561277 GNL3LQ9NVN8 582 aaKnown RBP24.6■■□□□ 1.53
TSPAN3-210ENST00000561277 COL1A1P02452 1464 aaPredicted RBP24.6■■□□□ 1.53
TSPAN3-210ENST00000561277 ADM5C9JUS6 153 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 WNT10BO00744 389 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 CCDC102BQ68D86 513 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 CREBZFQ9NS37 354 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 TTF2Q9UNY4 1162 aaKnown RBP24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 TMEM88BA6NKF7 163 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 MMP14P50281 582 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 DLK2Q6UY11 383 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 RPAP2Q8IXW5 612 aaPredicted RBP24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 TBC1D22AQ8WUA7 517 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 ZNF408Q9H9D4 720 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 EXOC6BQ9Y2D4 811 aa24.59■■□□□ 1.53
TSPAN3-210ENST00000561277 GRIK5Q16478 980 aa24.58■■□□□ 1.52
TSPAN3-210ENST00000561277 SULF1Q8IWU6 871 aa24.58■■□□□ 1.52
TSPAN3-210ENST00000561277 SCAF8Q9UPN6 1271 aaKnown RBP24.58■■□□□ 1.52
TSPAN3-210ENST00000561277 PCDHAC2Q9Y5I4 1007 aa24.58■■□□□ 1.52
TSPAN3-210ENST00000561277 DLGAP5Q15398 846 aa24.57■■□□□ 1.52
TSPAN3-210ENST00000561277 CFAP100Q494V2 611 aa24.57■■□□□ 1.52
TSPAN3-210ENST00000561277 POLR2AP24928 1970 aaKnown RBP24.57■■□□□ 1.52
TSPAN3-210ENST00000561277 HMMRO75330 724 aa24.56■■□□□ 1.52
TSPAN3-210ENST00000561277 RBM5P52756 815 aaKnown RBP eCLIP24.56■■□□□ 1.52
TSPAN3-210ENST00000561277 GORABQ5T7V8 394 aa24.56■■□□□ 1.52
TSPAN3-210ENST00000561277 SIRT2Q8IXJ6 389 aa24.56■■□□□ 1.52
TSPAN3-210ENST00000561277 TRPM7Q96QT4 1865 aa24.56■■□□□ 1.52
TSPAN3-210ENST00000561277 CELF2O95319 508 aaKnown RBP24.55■■□□□ 1.52
TSPAN3-210ENST00000561277 TNNI3KQ59H18 835 aa24.55■■□□□ 1.52
TSPAN3-210ENST00000561277 FPGT-TNNI3KV9GXZ4 949 aa24.55■■□□□ 1.52
TSPAN3-210ENST00000561277 WDR66Q8TBY9 1149 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 PITPNM2Q9BZ72 1349 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 SEMA3EO15041 775 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 RASGRF1Q13972 1273 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 CST9Q5W186 159 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 DNAJC5GQ8N7S2 189 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 GPR108Q9NPR9 543 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 DENND2AQ9ULE3 1009 aa24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 ABT1Q9ULW3 272 aaKnown RBP24.54■■□□□ 1.52
TSPAN3-210ENST00000561277 APBB1O00213 710 aa24.53■■□□□ 1.52
TSPAN3-210ENST00000561277 ZBED3Q96IU2 234 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-210ENST00000561277 MKRN1Q9UHC7 482 aaKnown RBP24.53■■□□□ 1.52
TSPAN3-210ENST00000561277 SPDYE2BA6NHP3 402 aa24.52■■□□□ 1.52
TSPAN3-210ENST00000561277 SPDYE6P0CI01 402 aa24.52■■□□□ 1.52
TSPAN3-210ENST00000561277 ERC1Q8IUD2 1116 aa24.52■■□□□ 1.52
TSPAN3-210ENST00000561277 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
TSPAN3-210ENST00000561277 SERPINA10Q9UK55 444 aa24.52■■□□□ 1.52
TSPAN3-210ENST00000561277 CRKP46108 304 aa24.51■■□□□ 1.51
TSPAN3-210ENST00000561277 HSP90AB4PQ58FF6 505 aa24.51■■□□□ 1.51
TSPAN3-210ENST00000561277 PRMT6Q96LA8 375 aaPredicted RBP24.51■■□□□ 1.51
TSPAN3-210ENST00000561277 DBNDD2Q9BQY9 259 aa24.51■■□□□ 1.51
TSPAN3-210ENST00000561277 AOX1Q06278 1338 aa24.51■■□□□ 1.51
TSPAN3-210ENST00000561277 CLRN2A0PK11 232 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 MYO1BO43795 1136 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 KLRG1Q96E93 195 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 CDCA5Q96FF9 252 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 PRDX5P30044 214 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 CRBNQ96SW2 442 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 SUGT1Q9Y2Z0 365 aa24.5■■□□□ 1.51
TSPAN3-210ENST00000561277 ECM29Q5VYK3 1845 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms