RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 WBP1LQ9NX94 342 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 TRPC6Q9Y210 931 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 ZNF804BA4D1E1 1349 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 RBBP6Q7Z6E9 1792 aaKnown RBP8.71□□□□□ -1.02
SPG11-224ENST00000561268 ANKRD18BA2A2Z9 1011 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 DEFB115Q30KQ5 88 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 GGA3Q9NZ52 723 aa8.7□□□□□ -1.02
SPG11-224ENST00000561268 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
SPG11-224ENST00000561268 FOXN1O15353 648 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 CELF2O95319 508 aaKnown RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 IL1R1P14778 569 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 ECE1P42892 770 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 FKBP1AP62942 108 aaKnown RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 TBC1D10BQ4KMP7 808 aaPredicted RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 LMBR1LQ6UX01 489 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 ANKRD44Q8N8A2 993 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 VGLL2Q8N8G2 317 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 CAPNS2Q96L46 248 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 ASTN2O75129 1339 aaPredicted RBP8.69□□□□□ -1.02
SPG11-224ENST00000561268 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
SPG11-224ENST00000561268 PHIPQ8WWQ0 1821 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 ATAD5Q96QE3 1844 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 ADM5C9JUS6 153 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 MAP2K2P36507 400 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 KRT26Q7Z3Y9 468 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 MTMR14Q8NCE2 650 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 MPHOSPH8Q99549 860 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 CD209Q9NNX6 404 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 MYOZ2Q9NPC6 264 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 ABT1Q9ULW3 272 aaKnown RBP8.68□□□□□ -1.02
SPG11-224ENST00000561268 RIPOR2Q9Y4F9 1068 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 FAM205AQ6ZU69 1335 aa8.68□□□□□ -1.02
SPG11-224ENST00000561268 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
SPG11-224ENST00000561268 WNT10BO00744 389 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 SIPA1L1O43166 1804 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
SPG11-224ENST00000561268 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPG11-224ENST00000561268 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
SPG11-224ENST00000561268 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 DOCK1Q14185 1865 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 CYP4F22Q6NT55 531 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 CERS5Q8N5B7 392 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 ANP32EQ9BTT0 268 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
SPG11-224ENST00000561268 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
SPG11-224ENST00000561268 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
SPG11-224ENST00000561268 MYH7P12883 1935 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 SNAP23O00161 211 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 MAP3K13O43283 966 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 RFX5P48382 616 aaPredicted RBP8.66□□□□□ -1.02
SPG11-224ENST00000561268 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
SPG11-224ENST00000561268 FKBP1BP68106 108 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 CCDC57Q2TAC2 916 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 DCPSQ96C86 337 aaKnown RBP8.66□□□□□ -1.02
SPG11-224ENST00000561268 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
SPG11-224ENST00000561268 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
SPG11-224ENST00000561268 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
SPG11-224ENST00000561268 MROH5Q6ZUA9 1318 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 TAF5LO75529 589 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 SEC24BO95487 1268 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 SLC10A3P09131 477 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 FGFR2P21802 821 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 NOGQ13253 232 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 SCARF1Q14162 830 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 ANGEL2Q5VTE6 544 aaKnown RBP8.65□□□□□ -1.02
SPG11-224ENST00000561268 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 DLK2Q6UY11 383 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 LDHAL6AQ6ZMR3 332 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 ZNF804AQ7Z570 1209 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
SPG11-224ENST00000561268 MXD3Q9BW11 206 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 PUS3Q9BZE2 481 aaKnown RBP8.65□□□□□ -1.02
SPG11-224ENST00000561268 SMC4Q9NTJ3 1288 aa8.65□□□□□ -1.02
SPG11-224ENST00000561268 DDX60LQ5H9U9 1706 aaKnown RBP8.65□□□□□ -1.03
SPG11-224ENST00000561268 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
SPG11-224ENST00000561268 G3V3G9 751 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 CA12O43570 354 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 TIE1P35590 1138 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 RARSP54136 660 aaKnown RBP8.64□□□□□ -1.03
SPG11-224ENST00000561268 HUNKP57058 714 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 GTF2IP78347 998 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 NBPF9Q3BBW0 867 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 DCAF8Q5TAQ9 597 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 TTLL5Q6EMB2 1281 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 RASAL3Q86YV0 1011 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms