RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	SAMD7	Q7Z3H4	446 aa		31.83	■■■□□ 2.69
TCF12-222	ENST00000561152	TRPM4	Q8TD43	1214 aa		31.83	■■■□□ 2.69
TCF12-222	ENST00000561152	MXD3	Q9BW11	206 aa		31.83	■■■□□ 2.69
TCF12-222	ENST00000561152	HDAC9	Q9UKV0	1011 aa		31.83	■■■□□ 2.69
TCF12-222	ENST00000561152		A0A1B0GUL7	405 aa		31.82	■■■□□ 2.68
TCF12-222	ENST00000561152	KIF4B	Q2VIQ3	1234 aa		31.82	■■■□□ 2.68
TCF12-222	ENST00000561152	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.82	■■■□□ 2.68
TCF12-222	ENST00000561152	HSPA6	P17066	643 aa		31.81	■■■□□ 2.68
TCF12-222	ENST00000561152	ERC1	Q8IUD2	1116 aa		31.81	■■■□□ 2.68
TCF12-222	ENST00000561152	MYH13	Q9UKX3	1938 aa		31.81	■■■□□ 2.68
TCF12-222	ENST00000561152	TIMM10	P62072	90 aa		31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	RBM26	Q5T8P6	1007 aa	Known RBP	31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	KIAA0825	Q8IV33	1275 aa		31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	TBC1D22A	Q8WUA7	517 aa		31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	MYOZ2	Q9NPC6	264 aa		31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	GPR108	Q9NPR9	543 aa		31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.8	■■■□□ 2.68
TCF12-222	ENST00000561152	HIRA	P54198	1017 aa	Predicted RBP	31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	MFSD14B	Q5SR56	506 aa		31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	MAP1S	Q66K74	1059 aa	Predicted RBP	31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	CNTROB	Q8N137	903 aa		31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	NEUROD6	Q96NK8	337 aa		31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	JAG2	Q9Y219	1238 aa		31.79	■■■□□ 2.68
TCF12-222	ENST00000561152	CHAF1A	Q13111	956 aa	Predicted RBP	31.78	■■■□□ 2.68
TCF12-222	ENST00000561152	CERS5	Q8N5B7	392 aa		31.78	■■■□□ 2.68
TCF12-222	ENST00000561152	PGAP2	Q9UHJ9	254 aa		31.78	■■■□□ 2.68
TCF12-222	ENST00000561152	SEMA3E	O15041	775 aa		31.77	■■■□□ 2.68
TCF12-222	ENST00000561152	XAGE2	Q96GT9	111 aa		31.77	■■■□□ 2.68
TCF12-222	ENST00000561152	ZBTB22	O15209	634 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	EGFR	P00533	1210 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	ADORA1	P30542	326 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	GORAB	Q5T7V8	394 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	CCDC102B	Q68D86	513 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	SIRT2	Q8IXJ6	389 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	EXOC6B	Q9Y2D4	811 aa		31.76	■■■□□ 2.67
TCF12-222	ENST00000561152	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.75	■■■□□ 2.67
TCF12-222	ENST00000561152	PHKA1	P46020	1223 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	APLP1	P51693	650 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	TNNI3K	Q59H18	835 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	WDR66	Q8TBY9	1149 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	DENND2A	Q9ULE3	1009 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	FPGT-TNNI3K	V9GXZ4	949 aa		31.74	■■■□□ 2.67
TCF12-222	ENST00000561152	ITGBL1	O95965	494 aa	Predicted RBP	31.73	■■■□□ 2.67
TCF12-222	ENST00000561152		F8W031	263 aa	Predicted RBP	31.72	■■■□□ 2.67
TCF12-222	ENST00000561152	DCPS	Q96C86	337 aa	Known RBP	31.72	■■■□□ 2.67
TCF12-222	ENST00000561152	CRBN	Q96SW2	442 aa		31.72	■■■□□ 2.67
TCF12-222	ENST00000561152	SUGT1	Q9Y2Z0	365 aa		31.72	■■■□□ 2.67
TCF12-222	ENST00000561152	PASK	Q96RG2	1323 aa		31.72	■■■□□ 2.67
TCF12-222	ENST00000561152	SCARF1	Q14162	830 aa		31.71	■■■□□ 2.67
TCF12-222	ENST00000561152	CDC37L1	Q7L3B6	337 aa		31.71	■■■□□ 2.67
TCF12-222	ENST00000561152	RAB11FIP3	O75154	756 aa		31.7	■■■□□ 2.67
TCF12-222	ENST00000561152	TTF2	Q9UNY4	1162 aa	Known RBP	31.7	■■■□□ 2.67
TCF12-222	ENST00000561152	AAMP	Q13685	434 aa		31.69	■■■□□ 2.66
TCF12-222	ENST00000561152	DLGAP5	Q15398	846 aa		31.69	■■■□□ 2.66
TCF12-222	ENST00000561152	KIF1BP	Q96EK5	621 aa		31.69	■■■□□ 2.66
TCF12-222	ENST00000561152	GGA3	Q9NZ52	723 aa		31.69	■■■□□ 2.66
TCF12-222	ENST00000561152	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.69	■■■□□ 2.66
TCF12-222	ENST00000561152	MTMR14	Q8NCE2	650 aa		31.68	■■■□□ 2.66
TCF12-222	ENST00000561152	RHPN1	Q8TCX5	695 aa		31.68	■■■□□ 2.66
TCF12-222	ENST00000561152	MAST3	O60307	1309 aa		31.68	■■■□□ 2.66
TCF12-222	ENST00000561152	PDS5A	Q29RF7	1337 aa	Known RBP	31.68	■■■□□ 2.66
TCF12-222	ENST00000561152	WNT10B	O00744	389 aa		31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	UQCRFS1P1	P0C7P4	283 aa		31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	CCDC158	Q5M9N0	1113 aa		31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	ZGPAT	Q8N5A5	531 aa	Known RBP	31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	SERPINA10	Q9UK55	444 aa		31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	PITPNM2	Q9BZ72	1349 aa		31.67	■■■□□ 2.66
TCF12-222	ENST00000561152	COL1A1	P02452	1464 aa	Predicted RBP	31.66	■■■□□ 2.66
TCF12-222	ENST00000561152	ANGEL2	Q5VTE6	544 aa	Known RBP	31.66	■■■□□ 2.66
TCF12-222	ENST00000561152	KRT26	Q7Z3Y9	468 aa		31.66	■■■□□ 2.66
TCF12-222	ENST00000561152	SULF1	Q8IWU6	871 aa		31.66	■■■□□ 2.66
TCF12-222	ENST00000561152	SALL1	Q9NSC2	1324 aa		31.66	■■■□□ 2.66
TCF12-222	ENST00000561152	ARID4A	P29374	1257 aa	Predicted RBP	31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	RBM5	P52756	815 aa	Known RBP eCLIP	31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	RASGRF1	Q13972	1273 aa		31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	NBPF9	Q3BBW0	867 aa		31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	CFAP100	Q494V2	611 aa		31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	CLASRP	Q8N2M8	674 aa	Known RBP	31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.65	■■■□□ 2.66
TCF12-222	ENST00000561152	MYO1B	O43795	1136 aa		31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	HDLBP	Q00341	1268 aa	Known RBP	31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	TTC39A	Q5SRH9	613 aa		31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	ZBED3	Q96IU2	234 aa	Predicted RBP	31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	DBNDD2	Q9BQY9	259 aa		31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	POLR2A	P24928	1970 aa	Known RBP	31.64	■■■□□ 2.66
TCF12-222	ENST00000561152	APBB1	O00213	710 aa		31.63	■■■□□ 2.65
TCF12-222	ENST00000561152	USP48	Q86UV5	1035 aa		31.63	■■■□□ 2.65
TCF12-222	ENST00000561152	EAF2	Q96CJ1	260 aa	Predicted RBP	31.63	■■■□□ 2.65
TCF12-222	ENST00000561152	TRPM7	Q96QT4	1865 aa		31.63	■■■□□ 2.65
TCF12-222	ENST00000561152	ASTN2	O75129	1339 aa	Predicted RBP	31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	ECM29	Q5VYK3	1845 aa		31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	AACS	Q86V21	672 aa		31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	MRI	Q9BWK5	157 aa		31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	IL1RAPL2	Q9NP60	686 aa		31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	CREBZF	Q9NS37	354 aa		31.62	■■■□□ 2.65
TCF12-222	ENST00000561152	SPDYE2B	A6NHP3	402 aa		31.61	■■■□□ 2.65
TCF12-222	ENST00000561152	TMEM88B	A6NKF7	163 aa		31.61	■■■□□ 2.65
TCF12-222	ENST00000561152	TRAF5	O00463	557 aa		31.61	■■■□□ 2.65
TCF12-222	ENST00000561152	LDHB	P07195	334 aa	Known RBP	31.61	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms