RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 SYNE4Q8N205 404 aa24.06■■□□□ 1.44
PSMA4-218ENST00000560099 KINO60870 393 aaKnown RBP24.06■■□□□ 1.44
PSMA4-218ENST00000560099 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
PSMA4-218ENST00000560099 RAB11FIP4Q86YS3 637 aa24.06■■□□□ 1.44
PSMA4-218ENST00000560099 COL5A2P05997 1499 aaPredicted RBP24.06■■□□□ 1.44
PSMA4-218ENST00000560099 SHANK3Q9BYB0 1731 aa24.06■■□□□ 1.44
PSMA4-218ENST00000560099 GOLGA6L19H0YKK7 550 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 IMMTQ16891 758 aaKnown RBP24.05■■□□□ 1.44
PSMA4-218ENST00000560099 BCL2L12Q9HB09 334 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 CTNNA3Q9UI47 895 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 HPS5Q9UPZ3 1129 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 AKAP2Q9Y2D5 859 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 PRC1O43663 620 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 MB21D2Q8IYB1 491 aaPredicted RBP24.05■■□□□ 1.44
PSMA4-218ENST00000560099 GJB4Q9NTQ9 266 aa24.05■■□□□ 1.44
PSMA4-218ENST00000560099 ANTXR2P58335 489 aa24.04■■□□□ 1.44
PSMA4-218ENST00000560099 SARM1Q6SZW1 724 aa24.04■■□□□ 1.44
PSMA4-218ENST00000560099 ZFYP08048 801 aaPredicted RBP24.04■■□□□ 1.44
PSMA4-218ENST00000560099 CDC25BP30305 580 aa24.04■■□□□ 1.44
PSMA4-218ENST00000560099 DHX40Q8IX18 779 aaKnown RBP24.04■■□□□ 1.44
PSMA4-218ENST00000560099 RTEL1Q9NZ71 1219 aa24.04■■□□□ 1.44
PSMA4-218ENST00000560099 KLF18A0A0U1RQI7 1052 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 APPBP2Q92624 585 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 ZMYND15Q9H091 742 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 MYH7P12883 1935 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 A0A1B0GVL5 298 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 POLR3DP05423 398 aaPredicted RBP24.03■■□□□ 1.44
PSMA4-218ENST00000560099 CSF1RP07333 972 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 CHAF1AQ13111 956 aaPredicted RBP24.03■■□□□ 1.44
PSMA4-218ENST00000560099 TRIM28Q13263 835 aaKnown RBP24.03■■□□□ 1.44
PSMA4-218ENST00000560099 ARID5BQ14865 1188 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 LRRFIP1Q32MZ4 808 aaKnown RBP24.03■■□□□ 1.44
PSMA4-218ENST00000560099 FMR1NBQ8N0W7 255 aaPredicted RBP24.03■■□□□ 1.44
PSMA4-218ENST00000560099 FBXO3Q9UK99 471 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 CLIC4Q9Y696 253 aa24.03■■□□□ 1.44
PSMA4-218ENST00000560099 PCCAP05165 728 aaPredicted RBP24.02■■□□□ 1.44
PSMA4-218ENST00000560099 TAF7LQ5H9L4 462 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 C16orf45Q96MC5 204 aaPredicted RBP24.02■■□□□ 1.44
PSMA4-218ENST00000560099 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 STRN4Q9NRL3 753 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 AKAP11Q9UKA4 1901 aa24.02■■□□□ 1.44
PSMA4-218ENST00000560099 GOLGA8BA8MQT2 603 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 IFIT5Q13325 482 aaKnown RBP24.01■■□□□ 1.43
PSMA4-218ENST00000560099 ADALQ6DHV7 355 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 MRPS27Q92552 414 aaKnown RBP24.01■■□□□ 1.43
PSMA4-218ENST00000560099 FBXW7Q969H0 707 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 C8orf76Q96K31 380 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 DENND2AQ9ULE3 1009 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 GPAA1O43292 621 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 NKX2-3Q8TAU0 364 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 PLA2G12BQ9BX93 195 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 ASAP1Q9ULH1 1129 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
PSMA4-218ENST00000560099 NDUFA8P51970 172 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 ZBTB38Q8NAP3 1195 aaPredicted RBP24■■□□□ 1.43
PSMA4-218ENST00000560099 FBXO18Q8NFZ0 1043 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 CHMP4CQ96CF2 233 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 MRFAP1L1Q96HT8 127 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 ANO10Q9NW15 660 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 ORC3Q9UBD5 711 aaPredicted RBP24■■□□□ 1.43
PSMA4-218ENST00000560099 BECN2A8MW95 431 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 MCAMP43121 646 aa24■■□□□ 1.43
PSMA4-218ENST00000560099 MYO5AQ9Y4I1 1855 aaKnown RBP24■■□□□ 1.43
PSMA4-218ENST00000560099 LRRC8AQ8IWT6 810 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 NCOA7Q8NI08 942 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 TMOD3Q9NYL9 352 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 RIC1Q4ADV7 1423 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 ATP2B3Q16720 1220 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 DDX60Q8IY21 1712 aaKnown RBP23.99■■□□□ 1.43
PSMA4-218ENST00000560099 RIPOR2Q9Y4F9 1068 aa23.99■■□□□ 1.43
PSMA4-218ENST00000560099 KIF28PB7ZC32 967 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 SDF4Q9BRK5 362 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 NBPF3Q9H094 633 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
PSMA4-218ENST00000560099 ZNF213O14771 459 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 GPTP24298 496 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 STK38Q15208 465 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 HLFQ16534 295 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 KIF6Q6ZMV9 814 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 AOPEPQ8N6M6 819 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 CCDC94Q9BW85 323 aaPredicted RBP23.98■■□□□ 1.43
PSMA4-218ENST00000560099 KAT6BQ8WYB5 2073 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 A0A1W2PQ27 194 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 A0A1W2PQ64 194 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 A0A1W2PQD8 194 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 CTIFO43310 598 aaKnown RBP23.98■■□□□ 1.43
PSMA4-218ENST00000560099 METTL24Q5JXM2 366 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 MYSM1Q5VVJ2 828 aa23.98■■□□□ 1.43
PSMA4-218ENST00000560099 RALYLQ86SE5 291 aaKnown RBP23.98■■□□□ 1.43
PSMA4-218ENST00000560099 NEDD4P46934 1319 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 GREM2Q9H772 168 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 DHX16O60231 1041 aaKnown RBP23.97■■□□□ 1.43
PSMA4-218ENST00000560099 TNNT1P13805 278 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 SF3A1Q15459 793 aaKnown RBP23.97■■□□□ 1.43
PSMA4-218ENST00000560099 LDHAL6AQ6ZMR3 332 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 PIGBQ92521 554 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 POLR3EQ9NVU0 708 aa23.97■■□□□ 1.43
PSMA4-218ENST00000560099 CPLX1O14810 134 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms