RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNF280AP59817 542 aaPredicted RBP14.14□□□□□ -0.15
SNX1-204ENST00000559061 TTLL5Q6EMB2 1281 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 DPF2Q92785 391 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 DCTPP1Q9H773 170 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 IL1RAPL2Q9NP60 686 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 HACL1Q9UJ83 578 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 PCDHAC2Q9Y5I4 1007 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 ASTN2O75129 1339 aaPredicted RBP14.14□□□□□ -0.15
SNX1-204ENST00000559061 HMMRO75330 724 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
SNX1-204ENST00000559061 RASGRF1Q13972 1273 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 PI16Q6UXB8 463 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 SAMD7Q7Z3H4 446 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 AGBL3Q8NEM8 1001 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 CNOT7Q9UIV1 285 aaKnown RBP14.13□□□□□ -0.15
SNX1-204ENST00000559061 DOCK2Q92608 1830 aa14.13□□□□□ -0.15
SNX1-204ENST00000559061 POLR2AP24928 1970 aaKnown RBP14.13□□□□□ -0.15
SNX1-204ENST00000559061 G3V3G9 751 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 APBB1O00213 710 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 SMARCA5O60264 1052 aaPredicted RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 IGHDP01880 384 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 ARID4AP29374 1257 aaPredicted RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 FKBP1AP62942 108 aaKnown RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 FBXW7Q969H0 707 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 ZBED3Q96IU2 234 aaPredicted RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 CCDC8Q9H0W5 538 aaPredicted RBP14.12□□□□□ -0.15
SNX1-204ENST00000559061 AKAP2Q9Y2D5 859 aa14.12□□□□□ -0.15
SNX1-204ENST00000559061 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
SNX1-204ENST00000559061 MCAMP43121 646 aa14.11□□□□□ -0.15
SNX1-204ENST00000559061 HDAC1Q13547 482 aaPredicted RBP14.11□□□□□ -0.15
SNX1-204ENST00000559061 CAVIN4Q5BKX8 364 aa14.11□□□□□ -0.15
SNX1-204ENST00000559061 MAST2Q6P0Q8 1798 aa14.11□□□□□ -0.15
SNX1-204ENST00000559061 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
SNX1-204ENST00000559061 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
SNX1-204ENST00000559061 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
SNX1-204ENST00000559061 MFSD14BQ5SR56 506 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 ERC1Q8IUD2 1116 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 KIAA0825Q8IV33 1275 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 ZNF384Q8TF68 577 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 KIF1BPQ96EK5 621 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 NEUROD6Q96NK8 337 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 ADARB2Q9NS39 739 aaKnown RBP14.1□□□□□ -0.15
SNX1-204ENST00000559061 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
SNX1-204ENST00000559061 RAB11FIP3O75154 756 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 TOMM70O94826 608 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 USP17L8P0C7I0 530 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 LMOD1P29536 600 aaPredicted RBP14.09□□□□□ -0.15
SNX1-204ENST00000559061 AACSQ86V21 672 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 RBM46Q8TBY0 533 aaKnown RBP14.09□□□□□ -0.15
SNX1-204ENST00000559061 PGAP2Q9UHJ9 254 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 PDS5AQ29RF7 1337 aaKnown RBP14.09□□□□□ -0.15
SNX1-204ENST00000559061 MYO3BQ8WXR4 1341 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 SALL1Q9NSC2 1324 aa14.09□□□□□ -0.15
SNX1-204ENST00000559061 F8W031 263 aaPredicted RBP14.08□□□□□ -0.16
SNX1-204ENST00000559061 PRDX5P30044 214 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 FMR1Q06787 632 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNX1-204ENST00000559061 AAMPQ13685 434 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 EAPPQ56P03 285 aaPredicted RBP14.08□□□□□ -0.16
SNX1-204ENST00000559061 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 DLK2Q6UY11 383 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 USP50Q70EL3 339 aaPredicted RBP14.08□□□□□ -0.16
SNX1-204ENST00000559061 LDHDQ86WU2 507 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 OTUD7AQ8TE49 926 aaPredicted RBP14.08□□□□□ -0.16
SNX1-204ENST00000559061 MYOZ2Q9NPC6 264 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 NDUFB9Q9Y6M9 179 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 SALL3Q9BXA9 1300 aa14.08□□□□□ -0.16
SNX1-204ENST00000559061 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
SNX1-204ENST00000559061 SEMA3EO15041 775 aa14.07□□□□□ -0.16
SNX1-204ENST00000559061 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
SNX1-204ENST00000559061 NBPF9Q3BBW0 867 aa14.07□□□□□ -0.16
SNX1-204ENST00000559061 ZNF512BQ96KM6 892 aaPredicted RBP14.07□□□□□ -0.16
SNX1-204ENST00000559061 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
SNX1-204ENST00000559061 H7C1D1 291 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 WNT10BO00744 389 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 RBM26Q5T8P6 1007 aaKnown RBP14.06□□□□□ -0.16
SNX1-204ENST00000559061 MAP1SQ66K74 1059 aaPredicted RBP14.06□□□□□ -0.16
SNX1-204ENST00000559061 TBC1D9Q6ZT07 1266 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
SNX1-204ENST00000559061 SMC5Q8IY18 1101 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
SNX1-204ENST00000559061 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 SNRKQ9NRH2 765 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 DENND2AQ9ULE3 1009 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 SCAF8Q9UPN6 1271 aaKnown RBP14.06□□□□□ -0.16
SNX1-204ENST00000559061 PASKQ96RG2 1323 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 TRPM7Q96QT4 1865 aa14.06□□□□□ -0.16
SNX1-204ENST00000559061 CYP2E1P05181 493 aaPredicted RBP14.05□□□□□ -0.16
SNX1-204ENST00000559061 C1QTNF8P60827 252 aa14.05□□□□□ -0.16
SNX1-204ENST00000559061 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
SNX1-204ENST00000559061 MTMR14Q8NCE2 650 aa14.05□□□□□ -0.16
SNX1-204ENST00000559061 PIH1D3Q9NQM4 214 aaKnown RBP14.05□□□□□ -0.16
SNX1-204ENST00000559061 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
SNX1-204ENST00000559061 CDK5RAP2Q96SN8 1893 aa14.05□□□□□ -0.16
SNX1-204ENST00000559061 ZAP70P43403 619 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 DIXDC1Q155Q3 683 aa14.04□□□□□ -0.16
SNX1-204ENST00000559061 CFAP100Q494V2 611 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms