RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PSMD14O00487 310 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 APLP1P51693 650 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 CXCL9Q07325 125 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 CCDC158Q5M9N0 1113 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 CHD1LQ86WJ1 897 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 SKAP1Q86WV1 359 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
GABPB1-208ENST00000558970 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
GABPB1-208ENST00000558970 FZD9O00144 591 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 TOMM70O94826 608 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 IL1R1P14778 569 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 NUCB1Q02818 461 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 SCARF1Q14162 830 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 CENPQQ7L2Z9 268 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-208ENST00000558970 PODNQ7Z5L7 613 aa15.22■□□□□ 0.03
GABPB1-208ENST00000558970 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-208ENST00000558970 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
GABPB1-208ENST00000558970 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
GABPB1-208ENST00000558970 MCAMP43121 646 aa15.21■□□□□ 0.03
GABPB1-208ENST00000558970 RASGRF1Q13972 1273 aa15.21■□□□□ 0.03
GABPB1-208ENST00000558970 TTLL5Q6EMB2 1281 aa15.21■□□□□ 0.03
GABPB1-208ENST00000558970 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
GABPB1-208ENST00000558970 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
GABPB1-208ENST00000558970 MYH7P12883 1935 aa15.21■□□□□ 0.02
GABPB1-208ENST00000558970 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
GABPB1-208ENST00000558970 USP17L3A6NCW0 530 aa15.2■□□□□ 0.02
GABPB1-208ENST00000558970 USP17L4A6NCW7 530 aa15.2■□□□□ 0.02
GABPB1-208ENST00000558970 USP17L1Q7RTZ2 530 aa15.2■□□□□ 0.02
GABPB1-208ENST00000558970 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
GABPB1-208ENST00000558970 MAST2Q6P0Q8 1798 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
GABPB1-208ENST00000558970 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 MX1P20591 662 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 ARID4AP29374 1257 aaPredicted RBP15.19■□□□□ 0.02
GABPB1-208ENST00000558970 DNAJC5GQ8N7S2 189 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 BOLA2Q9H3K6 86 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
GABPB1-208ENST00000558970 MYH2Q9UKX2 1941 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 PDE4AP27815 886 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 ZAP70P43403 619 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-208ENST00000558970 TNIP1Q15025 636 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 DACT2Q5SW24 774 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 DPY19L2Q6NUT2 758 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
GABPB1-208ENST00000558970 GRIK5Q16478 980 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 STRIP1Q5VSL9 837 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 RSBN1LQ6PCB5 846 aaPredicted RBP15.17■□□□□ 0.02
GABPB1-208ENST00000558970 KIAA0825Q8IV33 1275 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 GPC2Q8N158 579 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
GABPB1-208ENST00000558970 SCN4AP35499 1836 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 WDR90Q96KV7 1748 aa15.17■□□□□ 0.02
GABPB1-208ENST00000558970 ZC3H4Q9UPT8 1303 aaKnown RBP15.17■□□□□ 0.02
GABPB1-208ENST00000558970 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
GABPB1-208ENST00000558970 RGS3P49796 1198 aa15.16■□□□□ 0.02
GABPB1-208ENST00000558970 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
GABPB1-208ENST00000558970 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
GABPB1-208ENST00000558970 SALL3Q9BXA9 1300 aa15.16■□□□□ 0.02
GABPB1-208ENST00000558970 GOLIM4O00461 696 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 SEMA3EO15041 775 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
GABPB1-208ENST00000558970 ATP5JP18859 108 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 PRDX5P30044 214 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 SCNN1DP51172 638 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 PDE1AP54750 535 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
GABPB1-208ENST00000558970 WDR66Q8TBY9 1149 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
GABPB1-208ENST00000558970 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-208ENST00000558970 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-208ENST00000558970 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
GABPB1-208ENST00000558970 PLEKHM2Q8IWE5 1019 aa15.14■□□□□ 0.01
GABPB1-208ENST00000558970 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
GABPB1-208ENST00000558970 PI4K2BQ8TCG2 481 aa15.14■□□□□ 0.01
GABPB1-208ENST00000558970 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
GABPB1-208ENST00000558970 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
GABPB1-208ENST00000558970 TTF2Q9UNY4 1162 aaKnown RBP15.14■□□□□ 0.01
GABPB1-208ENST00000558970 TTC41PQ6P2S7 1318 aa15.14■□□□□ 0.01
GABPB1-208ENST00000558970 ERC2O15083 957 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 IDH1O75874 414 aaKnown RBP15.13■□□□□ 0.01
GABPB1-208ENST00000558970 LDHBP07195 334 aaKnown RBP15.13■□□□□ 0.01
GABPB1-208ENST00000558970 EPS15P42566 896 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
GABPB1-208ENST00000558970 FSTL1Q12841 308 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
GABPB1-208ENST00000558970 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 PAG1Q9NWQ8 432 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms