RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GPR101Q96P66 508 aaPredicted RBP12.76□□□□□ -0.37
USP3-207ENST00000558218 GMLQ99445 158 aa12.76□□□□□ -0.37
USP3-207ENST00000558218 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
USP3-207ENST00000558218 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
USP3-207ENST00000558218 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 ECE1P42892 770 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 VEGFBP49765 207 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 SCN9AQ15858 1988 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 DCPSQ96C86 337 aaKnown RBP12.75□□□□□ -0.37
USP3-207ENST00000558218 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
USP3-207ENST00000558218 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
USP3-207ENST00000558218 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
USP3-207ENST00000558218 PSME4Q14997 1843 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 KCNJ4P48050 445 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
USP3-207ENST00000558218 EPHA10Q5JZY3 1008 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
USP3-207ENST00000558218 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
USP3-207ENST00000558218 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 TRAF5O00463 557 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 TBC1D10BQ4KMP7 808 aaPredicted RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 DACT2Q5SW24 774 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
USP3-207ENST00000558218 TTLL5Q6EMB2 1281 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
USP3-207ENST00000558218 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
USP3-207ENST00000558218 MAP2K2P36507 400 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 FKBP1AP62942 108 aaKnown RBP12.72□□□□□ -0.37
USP3-207ENST00000558218 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 KAZALD1Q96I82 304 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 CD209Q9NNX6 404 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 MYOZ2Q9NPC6 264 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 SMC4Q9NTJ3 1288 aa12.72□□□□□ -0.37
USP3-207ENST00000558218 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
USP3-207ENST00000558218 IRS2Q9Y4H2 1338 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 PPP1R37O75864 691 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 IL1R1P14778 569 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 SCARF1Q14162 830 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.37
USP3-207ENST00000558218 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
USP3-207ENST00000558218 SPEF2Q9C093 1822 aa12.71□□□□□ -0.38
USP3-207ENST00000558218 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 TAF5LO75529 589 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 SASH1O94885 1247 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 EGFRP00533 1210 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP3-207ENST00000558218 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 CAPNS2Q96L46 248 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
USP3-207ENST00000558218 SLC34A2O95436 690 aa12.69□□□□□ -0.38
USP3-207ENST00000558218 FKBP1BP68106 108 aa12.69□□□□□ -0.38
USP3-207ENST00000558218 GTF2IP78347 998 aa12.69□□□□□ -0.38
USP3-207ENST00000558218 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
USP3-207ENST00000558218 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
USP3-207ENST00000558218 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
USP3-207ENST00000558218 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
USP3-207ENST00000558218 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
USP3-207ENST00000558218 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 ANKRD44Q8N8A2 993 aa12.68□□□□□ -0.38
USP3-207ENST00000558218 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
USP3-207ENST00000558218 GBA2Q9HCG7 927 aaPredicted RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
USP3-207ENST00000558218 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
USP3-207ENST00000558218 WNT10BO00744 389 aa12.67□□□□□ -0.38
USP3-207ENST00000558218 KLRK1P26718 216 aa12.67□□□□□ -0.38
USP3-207ENST00000558218 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
USP3-207ENST00000558218 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
USP3-207ENST00000558218 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
USP3-207ENST00000558218 TDRD7Q8NHU6 1098 aaKnown RBP12.67□□□□□ -0.38
USP3-207ENST00000558218 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms