RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PIP4K2BP78356 416 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF252P-AS1Q0IIN9 211 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 NXPE4Q6UWF7 544 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 NT5C1AQ9BXI3 368 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 UBE2OQ9C0C9 1292 aaKnown RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 SEC31BQ9NQW1 1179 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 PIK3R2O00459 728 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 GADD45BO75293 160 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 POLR3DP05423 398 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 CELA2BP08218 269 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 GRIA4P48058 902 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 PI16Q6UXB8 463 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 HS2ST1Q7LGA3 356 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 DDX54Q8TDD1 881 aaKnown RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 PLD4Q96BZ4 506 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 TMEM74Q96NL1 305 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 CLEC4MQ9H2X3 399 aaPredicted RBP2.84□□□□□ -1.95
HIF1A-212ENST00000557538 H3BRJ5 948 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 ADAMTS2O95450 1211 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 ESRRAP11474 423 aaPredicted RBP2.84□□□□□ -1.96
HIF1A-212ENST00000557538 DGKGP49619 791 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF385CQ66K41 422 aaPredicted RBP2.84□□□□□ -1.96
HIF1A-212ENST00000557538 C1orf229Q6ZS94 237 aaPredicted RBP2.84□□□□□ -1.96
HIF1A-212ENST00000557538 CHSY3Q70JA7 882 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 NCAPG2Q86XI2 1143 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 TMEM87AQ8NBN3 555 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 SPACA7Q96KW9 195 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 SAMM50Q9Y512 469 aa2.84□□□□□ -1.96
HIF1A-212ENST00000557538 CDC27P30260 824 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 PDZD3Q86UT5 571 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 FBXO11Q86XK2 927 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 PHC3Q8NDX5 983 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 EDARADDQ8WWZ3 215 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 SEC16BQ96JE7 1060 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 GSX1Q9H4S2 264 aaPredicted RBP2.83□□□□□ -1.96
HIF1A-212ENST00000557538 PRR36Q9H6K5 1346 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 ENC1O14682 589 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 TRIM37O94972 964 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 PCDH1Q08174 1060 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 FAAP100Q0VG06 881 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 LRRC14Q15048 493 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 ELMSAN1Q6PJG2 1045 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 FAM35AQ86V20 835 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 SLITRK4Q8IW52 837 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 KLHL23Q8NBE8 558 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 GPR25O00155 361 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 WFS1O76024 890 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 ARNTP27540 789 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 GMPRP36959 345 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 SOX9P48436 509 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 AFF1P51825 1210 aaKnown RBP2.83□□□□□ -1.96
HIF1A-212ENST00000557538 ATP11AP98196 1134 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 PPP2R3AQ06190 1150 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 RBL2Q08999 1139 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 ZNF423Q2M1K9 1284 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 MSL1Q68DK7 614 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 LYPD4Q6UWN0 246 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 Q6ZS46 218 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 RBBP8NLQ8NC74 664 aaPredicted RBP2.83□□□□□ -1.96
HIF1A-212ENST00000557538 TMEM39AQ9NV64 488 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 KANSL3Q9P2N6 904 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 STRIP2Q9ULQ0 834 aa2.83□□□□□ -1.96
HIF1A-212ENST00000557538 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.83□□□□□ -1.96
HIF1A-212ENST00000557538 CDC14CA4D256 554 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 ATE1O95260 518 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 SF3A1Q15459 793 aaKnown RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 HP1BP3Q5SSJ5 553 aaPredicted RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 KRT25Q7Z3Z0 450 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 ENAMQ9NRM1 1142 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 SHISA8B8ZZ34 492 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 LIG3P49916 1009 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 SUZ12Q15022 739 aaKnown RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 TSNAXIP1Q2TAA8 658 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 ADAMTSL4Q6UY14 1074 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 DTHD1Q6ZMT9 781 aa2.82□□□□□ -1.96
HIF1A-212ENST00000557538 REXO1Q8N1G1 1221 aaKnown RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 TAB3Q8N5C8 712 aaPredicted RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 SMG9Q9H0W8 520 aaKnown RBP2.82□□□□□ -1.96
HIF1A-212ENST00000557538 FAM221AA4D161 298 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 RGS9O75916 674 aaPredicted RBP2.81□□□□□ -1.96
HIF1A-212ENST00000557538 CAP2P40123 477 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 RACK1P63244 317 aaKnown RBP2.81□□□□□ -1.96
HIF1A-212ENST00000557538 KIF4BQ2VIQ3 1234 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 OR6P1Q8NGX9 317 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 EHMT1Q9H9B1 1298 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 PPME1Q9Y570 386 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 NEURL1BA8MQ27 555 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 DLL1O00548 723 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 CILPO75339 1184 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 ACPPP15309 386 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 FCGRTP55899 365 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 RING1Q06587 406 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 SPRED3Q2MJR0 410 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 RELL1Q8IUW5 271 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 TRIM42Q8IWZ5 723 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 TMEM130Q8N3G9 435 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 SNCAIPQ9Y6H5 919 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 J3QW42 95 aa2.81□□□□□ -1.96
HIF1A-212ENST00000557538 SOX1O00570 391 aaPredicted RBP2.81□□□□□ -1.96
HIF1A-212ENST00000557538 ERCC5P28715 1186 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms