RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ADAM11O75078 769 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 ARL4DP49703 201 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 NLRP12P59046 1061 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 BSNDQ8WZ55 320 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 OSGEPQ9NPF4 335 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 SOX13Q9UN79 622 aa9.1□□□□□ -0.95
HIF1A-209ENST00000556827 TM4SF5O14894 197 aa9.09□□□□□ -0.95
HIF1A-209ENST00000556827 ARTNQ5T4W7 220 aa9.09□□□□□ -0.95
HIF1A-209ENST00000556827 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
HIF1A-209ENST00000556827 UBL7Q96S82 380 aaPredicted RBP9.09□□□□□ -0.95
HIF1A-209ENST00000556827 ZFP64Q9NPA5 681 aa9.09□□□□□ -0.95
HIF1A-209ENST00000556827 LATS2Q9NRM7 1088 aa9.09□□□□□ -0.95
HIF1A-209ENST00000556827 DHX15O43143 795 aaKnown RBP9.08□□□□□ -0.96
HIF1A-209ENST00000556827 FSTP19883 344 aa9.08□□□□□ -0.96
HIF1A-209ENST00000556827 C19orf57Q0VDD7 668 aa9.08□□□□□ -0.96
HIF1A-209ENST00000556827 IKBKEQ14164 716 aa9.08□□□□□ -0.96
HIF1A-209ENST00000556827 ECM1Q16610 540 aa9.08□□□□□ -0.96
HIF1A-209ENST00000556827 UTP4Q969X6 686 aaKnown RBP9.08□□□□□ -0.96
HIF1A-209ENST00000556827 ZFYVE28Q9HCC9 887 aa9.08□□□□□ -0.96
HIF1A-209ENST00000556827 SOWAHDA6NJG2 315 aa9.07□□□□□ -0.96
HIF1A-209ENST00000556827 NDUFB5O43674 189 aa9.07□□□□□ -0.96
HIF1A-209ENST00000556827 POLR3DP05423 398 aaPredicted RBP9.07□□□□□ -0.96
HIF1A-209ENST00000556827 LRP8Q14114 963 aa9.07□□□□□ -0.96
HIF1A-209ENST00000556827 RAXQ9Y2V3 346 aa9.07□□□□□ -0.96
HIF1A-209ENST00000556827 SART1O43290 800 aaKnown RBP9.06□□□□□ -0.96
HIF1A-209ENST00000556827 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
HIF1A-209ENST00000556827 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
HIF1A-209ENST00000556827 BHLHE41Q9C0J9 482 aaPredicted RBP9.06□□□□□ -0.96
HIF1A-209ENST00000556827 STOML1Q9UBI4 398 aa9.06□□□□□ -0.96
HIF1A-209ENST00000556827 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
HIF1A-209ENST00000556827 VN1R5Q7Z5H4 357 aa9.05□□□□□ -0.96
HIF1A-209ENST00000556827 USP26Q9BXU7 913 aa9.05□□□□□ -0.96
HIF1A-209ENST00000556827 RNF208Q9H0X6 261 aa9.05□□□□□ -0.96
HIF1A-209ENST00000556827 HGSNATQ68CP4 663 aa9.04□□□□□ -0.96
HIF1A-209ENST00000556827 ANKRD34AQ69YU3 496 aa9.04□□□□□ -0.96
HIF1A-209ENST00000556827 FDX2Q6P4F2 183 aa9.04□□□□□ -0.96
HIF1A-209ENST00000556827 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
HIF1A-209ENST00000556827 SOX1O00570 391 aaPredicted RBP9.03□□□□□ -0.96
HIF1A-209ENST00000556827 GSC2O15499 205 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 NEFLP07196 543 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 ARHGAP4P98171 946 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 PDE3BQ13370 1112 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 SLC51AQ86UW1 340 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 ARMC10Q8N2F6 343 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
HIF1A-209ENST00000556827 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
HIF1A-209ENST00000556827 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
HIF1A-209ENST00000556827 METTL12A8MUP2 240 aa9.02□□□□□ -0.97
HIF1A-209ENST00000556827 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
HIF1A-209ENST00000556827 TMC1Q8TDI8 760 aa9.02□□□□□ -0.97
HIF1A-209ENST00000556827 MYRFLQ96LU7 910 aa9.02□□□□□ -0.97
HIF1A-209ENST00000556827 GZF1Q9H116 711 aaPredicted RBP9.02□□□□□ -0.97
HIF1A-209ENST00000556827 PATL2C9JE40 543 aaKnown RBP9.01□□□□□ -0.97
HIF1A-209ENST00000556827 GAS2O43903 313 aaKnown RBP9.01□□□□□ -0.97
HIF1A-209ENST00000556827 PREPP48147 710 aa9.01□□□□□ -0.97
HIF1A-209ENST00000556827 GALNT12Q8IXK2 581 aa9.01□□□□□ -0.97
HIF1A-209ENST00000556827 LIN7BQ9HAP6 207 aa9.01□□□□□ -0.97
HIF1A-209ENST00000556827 A0A1W2PP55 124 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 HYAL3O43820 417 aaPredicted RBP9□□□□□ -0.97
HIF1A-209ENST00000556827 IGLV1-40P01703 118 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 ESRRAP11474 423 aaPredicted RBP9□□□□□ -0.97
HIF1A-209ENST00000556827 GSTM4Q03013 218 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 KCNF1Q9H3M0 494 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
HIF1A-209ENST00000556827 C7orf69Q9H7B7 122 aa9□□□□□ -0.97
HIF1A-209ENST00000556827 BMP3P12645 472 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 ORC1Q13415 861 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 NUTM2GQ5VZR2 741 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
HIF1A-209ENST00000556827 CCNJLQ8IV13 435 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 TRIM42Q8IWZ5 723 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
HIF1A-209ENST00000556827 LOC100289279A0A1B0GTE1 492 aa8.98□□□□□ -0.97
HIF1A-209ENST00000556827 CPNE3O75131 537 aaKnown RBP8.98□□□□□ -0.97
HIF1A-209ENST00000556827 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
HIF1A-209ENST00000556827 ERCC6Q03468 1493 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 A0A096LPE4 126 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 HMX2A2RU54 273 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 EIF4EBP3O60516 100 aaPredicted RBP8.97□□□□□ -0.97
HIF1A-209ENST00000556827 PCDH1Q08174 1060 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 NFIAQ12857 509 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 BEND4Q6ZU67 534 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 C12orf50Q8NA57 414 aaPredicted RBP8.97□□□□□ -0.97
HIF1A-209ENST00000556827 FAM129BQ96TA1 746 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 CLEC4MQ9H2X3 399 aaPredicted RBP8.97□□□□□ -0.97
HIF1A-209ENST00000556827 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
HIF1A-209ENST00000556827 MEGF11A6BM72 1044 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 SSTR4P31391 388 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 GRIA4P48058 902 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 SPRED3Q2MJR0 410 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 CLEC10AQ8IUN9 316 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 TCF12Q99081 682 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 EHD4Q9H223 541 aa8.96□□□□□ -0.98
HIF1A-209ENST00000556827 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms