RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 GJA8P48165 433 aa12.8□□□□□ -0.36
SRSF5-216ENST00000556647 KIF22Q14807 665 aa12.8□□□□□ -0.36
SRSF5-216ENST00000556647 MAP3K11Q16584 847 aa12.8□□□□□ -0.36
SRSF5-216ENST00000556647 KCNV2Q8TDN2 545 aa12.8□□□□□ -0.36
SRSF5-216ENST00000556647 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
SRSF5-216ENST00000556647 PSME4Q14997 1843 aa12.79□□□□□ -0.36
SRSF5-216ENST00000556647 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
SRSF5-216ENST00000556647 FARP2O94887 1054 aaPredicted RBP12.79□□□□□ -0.36
SRSF5-216ENST00000556647 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
SRSF5-216ENST00000556647 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
SRSF5-216ENST00000556647 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
SRSF5-216ENST00000556647 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
SRSF5-216ENST00000556647 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
SRSF5-216ENST00000556647 COL4A1P02462 1669 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 ANXA1P04083 346 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 GJB1P08034 283 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 CCL5P13501 91 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 BCAMP50895 628 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
SRSF5-216ENST00000556647 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
SRSF5-216ENST00000556647 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
SRSF5-216ENST00000556647 CC2D1BQ5T0F9 858 aaKnown RBP12.78□□□□□ -0.36
SRSF5-216ENST00000556647 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 RNF208Q9H0X6 261 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 DEFB129Q9H1M3 183 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 LAMB1P07942 1786 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
SRSF5-216ENST00000556647 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
SRSF5-216ENST00000556647 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
SRSF5-216ENST00000556647 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
SRSF5-216ENST00000556647 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.37
SRSF5-216ENST00000556647 HTATSF1O43719 755 aaKnown RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 BMP8BP34820 402 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 IREB2P48200 963 aaKnown RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 PRMT2P55345 433 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 LRIT3Q3SXY7 679 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 PNISRQ8TF01 805 aaKnown RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 GDF15Q99988 308 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
SRSF5-216ENST00000556647 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
SRSF5-216ENST00000556647 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 UNCXA6NJT0 531 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 GNRH1P01148 92 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 GRK4P32298 578 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 PDIA6Q15084 440 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 CCL15Q16663 113 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
SRSF5-216ENST00000556647 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 ELP3Q9H9T3 547 aa12.75□□□□□ -0.37
SRSF5-216ENST00000556647 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
SRSF5-216ENST00000556647 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
SRSF5-216ENST00000556647 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
SRSF5-216ENST00000556647 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
SRSF5-216ENST00000556647 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
SRSF5-216ENST00000556647 ZMYND8Q9ULU4 1186 aaPredicted RBP12.74□□□□□ -0.37
SRSF5-216ENST00000556647 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 UBXN2AP68543 259 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 NBPF12Q5TAG4 269 aaPredicted RBP12.73□□□□□ -0.37
SRSF5-216ENST00000556647 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 FAM122AQ96E09 287 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
SRSF5-216ENST00000556647 IRS2Q9Y4H2 1338 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 TLR2O60603 784 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 SGPL1O95470 568 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
SRSF5-216ENST00000556647 PLA2G5P39877 138 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 E2F4Q16254 413 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
SRSF5-216ENST00000556647 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
SRSF5-216ENST00000556647 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
SRSF5-216ENST00000556647 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
SRSF5-216ENST00000556647 SYN1P17600 705 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 ATP2B4P23634 1241 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 HOXD10P28358 340 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 TIE1P35590 1138 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 PSMC4P43686 418 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 GTF2A2P52657 109 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■□□□□ 10.8
SRSF5-216ENST00000556647 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
SRSF5-216ENST00000556647 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms