RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
ACTN1-221ENST00000556571 CLMNQ96JQ2 1002 aa15.18■□□□□ 0.02
ACTN1-221ENST00000556571 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-221ENST00000556571 IGF2BP3O00425 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
ACTN1-221ENST00000556571 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-221ENST00000556571 IREB2P48200 963 aaKnown RBP15.17■□□□□ 0.02
ACTN1-221ENST00000556571 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
ACTN1-221ENST00000556571 FLIIQ13045 1269 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 DNAAF4Q8WXU2 420 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 MYH3P11055 1940 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
ACTN1-221ENST00000556571 KIAA0100Q14667 2235 aaKnown RBP15.16■□□□□ 0.02
ACTN1-221ENST00000556571 ZNF646O15015 1829 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-221ENST00000556571 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 TAF5LO75529 589 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 IL1R1P14778 569 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 CCDC27Q2M243 656 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-221ENST00000556571 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
ACTN1-221ENST00000556571 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
ACTN1-221ENST00000556571 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 SNAP23O00161 211 aa15.15■□□□□ 0.02
ACTN1-221ENST00000556571 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 IFIT5Q13325 482 aaKnown RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 NBPF12Q5TAG4 269 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 HELBQ8NG08 1087 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-221ENST00000556571 VEZTQ9HBM0 779 aa15.15■□□□□ 0.02
ACTN1-221ENST00000556571 PCDHAC2Q9Y5I4 1007 aa15.15■□□□□ 0.02
ACTN1-221ENST00000556571 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 CRHR2Q13324 411 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 RASA3Q14644 834 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 WWC1Q8IX03 1113 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 ANKRD13AQ8IZ07 590 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 EFCC1Q9HA90 598 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
ACTN1-221ENST00000556571 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-221ENST00000556571 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
ACTN1-221ENST00000556571 SP3Q02447 781 aa15.13■□□□□ 0.01
ACTN1-221ENST00000556571 CD99L2Q8TCZ2 262 aa15.13■□□□□ 0.01
ACTN1-221ENST00000556571 ARMC5Q96C12 935 aa15.13■□□□□ 0.01
ACTN1-221ENST00000556571 IL16Q14005 1332 aa15.13■□□□□ 0.01
ACTN1-221ENST00000556571 GJA5P36382 358 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 FOXO4P98177 505 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 TNFAIP1Q13829 316 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
ACTN1-221ENST00000556571 PTPN18Q99952 460 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 HTTP42858 3142 aa15.12■□□□□ 0.01
ACTN1-221ENST00000556571 ARHGEF6Q15052 776 aa15.11■□□□□ 0.01
ACTN1-221ENST00000556571 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
ACTN1-221ENST00000556571 FAM205AQ6ZU69 1335 aa15.11■□□□□ 0.01
ACTN1-221ENST00000556571 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
ACTN1-221ENST00000556571 LMBR1LQ6UX01 489 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 LDHAL6AQ6ZMR3 332 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 OPTNQ96CV9 577 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 TMEM106CQ9BVX2 250 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 ELP3Q9H9T3 547 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 ZNF70Q9UC06 446 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-221ENST00000556571 SERPINA10Q9UK55 444 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 AOX1Q06278 1338 aa15.1■□□□□ 0.01
ACTN1-221ENST00000556571 MKI67P46013 3256 aaKnown RBP15.1■□□□□ 0.01
ACTN1-221ENST00000556571 PLIN1O60240 522 aa15.09■□□□□ 0.01
ACTN1-221ENST00000556571 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
ACTN1-221ENST00000556571 BEND3Q5T5X7 828 aa15.09■□□□□ 0.01
ACTN1-221ENST00000556571 MS4A4AQ96JQ5 239 aa15.09■□□□□ 0.01
ACTN1-221ENST00000556571 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
ACTN1-221ENST00000556571 VAMP4O75379 141 aa15.08■□□□□ 0
ACTN1-221ENST00000556571 EN2P19622 333 aaPredicted RBP15.08■□□□□ 0
ACTN1-221ENST00000556571 MFSD14BQ5SR56 506 aa15.08■□□□□ 0
ACTN1-221ENST00000556571 NBPF11Q86T75 865 aa15.08■□□□□ 0
ACTN1-221ENST00000556571 TDRD7Q8NHU6 1098 aaKnown RBP15.08■□□□□ 0
ACTN1-221ENST00000556571 ZNF594Q96JF6 807 aaPredicted RBP15.08■□□□□ 0
ACTN1-221ENST00000556571 TDRD3Q9H7E2 651 aaKnown RBP15.08■□□□□ 0
ACTN1-221ENST00000556571 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
ACTN1-221ENST00000556571 TTF2Q9UNY4 1162 aaKnown RBP15.08■□□□□ 0
ACTN1-221ENST00000556571 HIBADHP31937 336 aaKnown RBP15.07■□□□□ 0
ACTN1-221ENST00000556571 TNNI2P48788 182 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 GTF2A2P52657 109 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 MAP3K9P80192 1104 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 UBE4AQ14139 1066 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.07■□□□□ 0
ACTN1-221ENST00000556571 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
ACTN1-221ENST00000556571 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 ZNF333Q96JL9 665 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 TEPSINQ96N21 525 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
ACTN1-221ENST00000556571 CCL15-CCL14A0A0B4J2E2 113 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 F6X3S4 739 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 GRM8O00222 908 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 WDHD1O75717 1129 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms