RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
SNX6-207ENST00000556303 KIAA0825Q8IV33 1275 aa15.8■□□□□ 0.12
SNX6-207ENST00000556303 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
SNX6-207ENST00000556303 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
SNX6-207ENST00000556303 PUS3Q9BZE2 481 aaKnown RBP15.8■□□□□ 0.12
SNX6-207ENST00000556303 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
SNX6-207ENST00000556303 AOC2O75106 756 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 PDE8BO95263 885 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 HSPA8P11142 646 aaKnown RBP15.79■□□□□ 0.12
SNX6-207ENST00000556303 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 METTL24Q5JXM2 366 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
SNX6-207ENST00000556303 DLK2Q6UY11 383 aa15.79■□□□□ 0.12
SNX6-207ENST00000556303 FAM84BQ96KN1 310 aaPredicted RBP15.79■□□□□ 0.12
SNX6-207ENST00000556303 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
SNX6-207ENST00000556303 UBTFL1P0CB47 393 aaPredicted RBP15.78■□□□□ 0.12
SNX6-207ENST00000556303 NF2P35240 595 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 ZNF157P51786 506 aaPredicted RBP15.78■□□□□ 0.12
SNX6-207ENST00000556303 LBX1P52954 281 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 CAVIN4Q5BKX8 364 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 CERS5Q8N5B7 392 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
SNX6-207ENST00000556303 FAM155AB1AL88 458 aaPredicted RBP15.77■□□□□ 0.12
SNX6-207ENST00000556303 MYO1BO43795 1136 aa15.77■□□□□ 0.12
SNX6-207ENST00000556303 LRRC24Q50LG9 513 aa15.77■□□□□ 0.12
SNX6-207ENST00000556303 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
SNX6-207ENST00000556303 VPS37DQ86XT2 251 aa15.77■□□□□ 0.12
SNX6-207ENST00000556303 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.12
SNX6-207ENST00000556303 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
SNX6-207ENST00000556303 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.11
SNX6-207ENST00000556303 EYA2O00167 538 aa15.76■□□□□ 0.11
SNX6-207ENST00000556303 SLC10A3P09131 477 aa15.76■□□□□ 0.11
SNX6-207ENST00000556303 GYG1P46976 350 aa15.76■□□□□ 0.11
SNX6-207ENST00000556303 RFX5P48382 616 aaPredicted RBP15.76■□□□□ 0.11
SNX6-207ENST00000556303 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
SNX6-207ENST00000556303 PUM3Q15397 648 aaKnown RBP15.76■□□□□ 0.11
SNX6-207ENST00000556303 SERPINA10Q9UK55 444 aa15.76■□□□□ 0.11
SNX6-207ENST00000556303 PAPPA2Q9BXP8 1791 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 CIAO1O76071 339 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 IFIT1P09914 478 aaKnown RBP15.75■□□□□ 0.11
SNX6-207ENST00000556303 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 SAGE1Q9NXZ1 904 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 SUGT1Q9Y2Z0 365 aa15.75■□□□□ 0.11
SNX6-207ENST00000556303 UNCXA6NJT0 531 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 GNAI3P08754 354 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 FGFR2P21802 821 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 HDLBPQ00341 1268 aaKnown RBP15.74■□□□□ 0.11
SNX6-207ENST00000556303 ARMC9Q7Z3E5 817 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 MIER1Q8N108 512 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 LPIN2Q92539 896 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 DEFB129Q9H1M3 183 aa15.74■□□□□ 0.11
SNX6-207ENST00000556303 ZBTB22O15209 634 aa15.73■□□□□ 0.11
SNX6-207ENST00000556303 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
SNX6-207ENST00000556303 F8W031 263 aaPredicted RBP15.72■□□□□ 0.11
SNX6-207ENST00000556303 FRAT2O75474 233 aaPredicted RBP15.72■□□□□ 0.11
SNX6-207ENST00000556303 SLC5A1P13866 664 aa15.72■□□□□ 0.11
SNX6-207ENST00000556303 KIF23Q02241 960 aaPredicted RBP15.72■□□□□ 0.11
SNX6-207ENST00000556303 TNFAIP1Q13829 316 aa15.72■□□□□ 0.11
SNX6-207ENST00000556303 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
SNX6-207ENST00000556303 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
SNX6-207ENST00000556303 PRMT6Q96LA8 375 aaPredicted RBP15.72■□□□□ 0.11
SNX6-207ENST00000556303 COPRSQ9NQ92 184 aa15.72■□□□□ 0.11
SNX6-207ENST00000556303 TTF2Q9UNY4 1162 aaKnown RBP15.72■□□□□ 0.11
SNX6-207ENST00000556303 IL15P40933 162 aaPredicted RBP15.71■□□□□ 0.11
SNX6-207ENST00000556303 RBM5P52756 815 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX6-207ENST00000556303 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
SNX6-207ENST00000556303 ATG9AQ7Z3C6 839 aa15.71■□□□□ 0.11
SNX6-207ENST00000556303 RASAL3Q86YV0 1011 aa15.71■□□□□ 0.11
SNX6-207ENST00000556303 ZIC5Q96T25 663 aa15.71■□□□□ 0.11
SNX6-207ENST00000556303 CEP126Q9P2H0 1117 aa15.71■□□□□ 0.11
SNX6-207ENST00000556303 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
SNX6-207ENST00000556303 PPP1R12BO60237 982 aaPredicted RBP15.7■□□□□ 0.1
SNX6-207ENST00000556303 BCAMP50895 628 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNX6-207ENST00000556303 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
SNX6-207ENST00000556303 MTX1Q13505 466 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 TTLL12Q14166 644 aaPredicted RBP15.7■□□□□ 0.1
SNX6-207ENST00000556303 LDLRAD1Q5T700 205 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 PRAMEF18Q5VWM3 479 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 CSRNP1Q96S65 589 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 SCAF8Q9UPN6 1271 aaKnown RBP15.7■□□□□ 0.1
SNX6-207ENST00000556303 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
SNX6-207ENST00000556303 MAST3O60307 1309 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 ECM29Q5VYK3 1845 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 UBE2Q2LH0YL09 131 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 TRIM27P14373 513 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
SNX6-207ENST00000556303 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 MEIS3Q99687 375 aa15.69■□□□□ 0.1
SNX6-207ENST00000556303 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
SNX6-207ENST00000556303 BCAR3O75815 825 aa15.68■□□□□ 0.1
SNX6-207ENST00000556303 CRKP46108 304 aa15.68■□□□□ 0.1
SNX6-207ENST00000556303 VEZTQ9HBM0 779 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms