RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 FAM205AQ6ZU69 1335 aa17.34■□□□□ 0.37
SNX6-206ENST00000556162 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
SNX6-206ENST00000556162 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
SNX6-206ENST00000556162 RPS12P25398 132 aaKnown RBP17.33■□□□□ 0.37
SNX6-206ENST00000556162 MYO3BQ8WXR4 1341 aa17.33■□□□□ 0.36
SNX6-206ENST00000556162 ZBTB22O15209 634 aa17.33■□□□□ 0.36
SNX6-206ENST00000556162 GMPSP49915 693 aaPredicted RBP17.33■□□□□ 0.36
SNX6-206ENST00000556162 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
SNX6-206ENST00000556162 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.36
SNX6-206ENST00000556162 SCN9AQ15858 1988 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
SNX6-206ENST00000556162 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
SNX6-206ENST00000556162 RASGRF1Q13972 1273 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 WDR66Q8TBY9 1149 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 DPF2Q92785 391 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
SNX6-206ENST00000556162 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
SNX6-206ENST00000556162 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
SNX6-206ENST00000556162 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
SNX6-206ENST00000556162 MFSD14BQ5SR56 506 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 NUCB1Q02818 461 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
SNX6-206ENST00000556162 SPATA5Q8NB90 893 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 RRAGCQ9HB90 399 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
SNX6-206ENST00000556162 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
SNX6-206ENST00000556162 SCNN1DP51172 638 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 GMLQ99445 158 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 LNPKQ9C0E8 428 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 GPRC5DQ9NZD1 345 aa17.3■□□□□ 0.36
SNX6-206ENST00000556162 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
SNX6-206ENST00000556162 PDS5AQ29RF7 1337 aaKnown RBP17.29■□□□□ 0.36
SNX6-206ENST00000556162 H7C1D1 291 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 MCAMP43121 646 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 SCARF1Q14162 830 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 CERS5Q8N5B7 392 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
SNX6-206ENST00000556162 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
SNX6-206ENST00000556162 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 ECHDC1Q9NTX5 307 aa17.29■□□□□ 0.36
SNX6-206ENST00000556162 POTECB2RU33 542 aa17.28■□□□□ 0.36
SNX6-206ENST00000556162 EPS15P42566 896 aa17.28■□□□□ 0.36
SNX6-206ENST00000556162 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
SNX6-206ENST00000556162 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
SNX6-206ENST00000556162 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
SNX6-206ENST00000556162 F8W031 263 aaPredicted RBP17.27■□□□□ 0.36
SNX6-206ENST00000556162 ATP5JP18859 108 aa17.27■□□□□ 0.36
SNX6-206ENST00000556162 MMP14P50281 582 aa17.27■□□□□ 0.36
SNX6-206ENST00000556162 PI16Q6UXB8 463 aa17.27■□□□□ 0.36
SNX6-206ENST00000556162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNX6-206ENST00000556162 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
SNX6-206ENST00000556162 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.36
SNX6-206ENST00000556162 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.36
SNX6-206ENST00000556162 SALL1Q9NSC2 1324 aa17.27■□□□□ 0.35
SNX6-206ENST00000556162 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.35
SNX6-206ENST00000556162 ABCF2Q9UG63 623 aa17.27■□□□□ 0.35
SNX6-206ENST00000556162 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SNX6-206ENST00000556162 WDR90Q96KV7 1748 aa17.26■□□□□ 0.35
SNX6-206ENST00000556162 MX1P20591 662 aa17.26■□□□□ 0.35
SNX6-206ENST00000556162 EPHX2P34913 555 aa17.26■□□□□ 0.35
SNX6-206ENST00000556162 SPTY2D1Q68D10 685 aaPredicted RBP17.26■□□□□ 0.35
SNX6-206ENST00000556162 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
SNX6-206ENST00000556162 ADARB2Q9NS39 739 aaKnown RBP17.26■□□□□ 0.35
SNX6-206ENST00000556162 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
SNX6-206ENST00000556162 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
SNX6-206ENST00000556162 SHTN1A0MZ66 631 aa17.25■□□□□ 0.35
SNX6-206ENST00000556162 LDHBP07195 334 aaKnown RBP17.25■□□□□ 0.35
SNX6-206ENST00000556162 ZAP70P43403 619 aa17.25■□□□□ 0.35
SNX6-206ENST00000556162 ZNF280AP59817 542 aaPredicted RBP17.25■□□□□ 0.35
SNX6-206ENST00000556162 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
SNX6-206ENST00000556162 ERC2O15083 957 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 GRIK5Q16478 980 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
SNX6-206ENST00000556162 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
SNX6-206ENST00000556162 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
SNX6-206ENST00000556162 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
SNX6-206ENST00000556162 MYOZ2Q9NPC6 264 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 MAST3O60307 1309 aa17.24■□□□□ 0.35
SNX6-206ENST00000556162 PRDX5P30044 214 aa17.23■□□□□ 0.35
SNX6-206ENST00000556162 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
SNX6-206ENST00000556162 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
SNX6-206ENST00000556162 HAUS7Q99871 368 aa17.23■□□□□ 0.35
SNX6-206ENST00000556162 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms