RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 DTHD1Q6ZMT9 781 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 ZNF417Q8TAU3 575 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 ZNF587Q96SQ5 575 aaPredicted RBP5.59□□□□□ -1.51
SRP54-209ENST00000555746 MUC3BQ9H195 1237 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 ENAMQ9NRM1 1142 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 SCAMP3O14828 347 aaKnown RBP5.58□□□□□ -1.52
SRP54-209ENST00000555746 NID1P14543 1247 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 CDC27P30260 824 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
SRP54-209ENST00000555746 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 VN1R5Q7Z5H4 357 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 SVOPQ8N4V2 548 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 ASAP3Q8TDY4 903 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
SRP54-209ENST00000555746 CLEC4MQ9H2X3 399 aaPredicted RBP5.58□□□□□ -1.52
SRP54-209ENST00000555746 TCF3P15923 654 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 EPHA1P21709 976 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 AMPD1P23109 780 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 MEI1Q5TIA1 1274 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 GDF6Q6KF10 455 aaPredicted RBP5.57□□□□□ -1.52
SRP54-209ENST00000555746 C8orf86Q6ZUL3 223 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 NOC4LQ9BVI4 516 aaKnown RBP5.57□□□□□ -1.52
SRP54-209ENST00000555746 NACADO15069 1562 aa5.57□□□□□ -1.52
SRP54-209ENST00000555746 FAM177BA6PVY3 158 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 H3BRJ5 948 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 ESRRAP11474 423 aaPredicted RBP5.56□□□□□ -1.52
SRP54-209ENST00000555746 CABP4P57796 275 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 FANCCQ00597 558 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 PCDH1Q08174 1060 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 FAAP100Q0VG06 881 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 SV2BQ7L1I2 683 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 WFDC8Q8IUA0 241 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 IL22RA1Q8N6P7 574 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 NEDD1Q8NHV4 660 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 WNT8BQ93098 351 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 CEP44Q9C0F1 390 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 SOX17Q9H6I2 414 aaPredicted RBP5.56□□□□□ -1.52
SRP54-209ENST00000555746 SEC31BQ9NQW1 1179 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 SH2B1Q9NRF2 756 aaPredicted RBP5.56□□□□□ -1.52
SRP54-209ENST00000555746 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
SRP54-209ENST00000555746 AKAP2Q9Y2D5 859 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 PPME1Q9Y570 386 aa5.56□□□□□ -1.52
SRP54-209ENST00000555746 B3GALT4O96024 378 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 ZNF76P36508 570 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 ZNF423Q2M1K9 1284 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 LINC00114Q6XXX2 140 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
SRP54-209ENST00000555746 DTWD1Q8N5C7 304 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 NECAB3Q96P71 396 aaPredicted RBP5.55□□□□□ -1.52
SRP54-209ENST00000555746 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
SRP54-209ENST00000555746 ERCC6Q03468 1493 aa5.55□□□□□ -1.52
SRP54-209ENST00000555746 EIF4G1Q04637 1599 aaKnown RBP5.55□□□□□ -1.52
SRP54-209ENST00000555746 SOX1O00570 391 aaPredicted RBP5.54□□□□□ -1.52
SRP54-209ENST00000555746 ENC1O14682 589 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 TM4SF5O14894 197 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
SRP54-209ENST00000555746 PIP4K2BP78356 416 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 HDLBPQ00341 1268 aaKnown RBP5.54□□□□□ -1.52
SRP54-209ENST00000555746 IKBKEQ14164 716 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 MAP4K3Q8IVH8 894 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 RNF34Q969K3 372 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
SRP54-209ENST00000555746 PIK3R2O00459 728 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 SNRPNP63162 240 aaKnown RBP5.53□□□□□ -1.52
SRP54-209ENST00000555746 INSM1Q01101 510 aaPredicted RBP5.53□□□□□ -1.52
SRP54-209ENST00000555746 SETDB1Q15047 1291 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 TPTE2Q6XPS3 522 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 HS2ST1Q7LGA3 356 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 ERMP1Q7Z2K6 904 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 TRIM11Q96F44 468 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 RRAGCQ9HB90 399 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 MKL2Q9ULH7 1088 aa5.53□□□□□ -1.52
SRP54-209ENST00000555746 LINC01387J3KSC0 135 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 GNB5O14775 395 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 FSCN2O14926 492 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 FBXO24O75426 580 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 RLBP1P12271 317 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 PPP2R3AQ06190 1150 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 CCDC85BQ15834 202 aaPredicted RBP5.52□□□□□ -1.53
SRP54-209ENST00000555746 DMRTC2Q8IXT2 367 aaPredicted RBP5.52□□□□□ -1.53
SRP54-209ENST00000555746 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
SRP54-209ENST00000555746 GPN3Q9UHW5 284 aaPredicted RBP5.52□□□□□ -1.53
SRP54-209ENST00000555746 CELA3AP09093 270 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 NME2P22392 152 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 ARL4DP49703 201 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 RPS26P62854 115 aaKnown RBP5.51□□□□□ -1.53
SRP54-209ENST00000555746 RAD51AP2Q09MP3 1159 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 PWP1Q13610 501 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 HGSNATQ68CP4 663 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
SRP54-209ENST00000555746 DCAF11Q8TEB1 546 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 NRSN2Q9GZP1 204 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 ADAMTS8Q9UP79 889 aa5.51□□□□□ -1.53
SRP54-209ENST00000555746 SHROOM4Q9ULL8 1493 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms