RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 RASAL3Q86YV0 1011 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 KIAA0825Q8IV33 1275 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 KAZALD1Q96I82 304 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 SUCLG2Q96I99 432 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 MXD3Q9BW11 206 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 CNNM1Q9NRU3 951 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 OTOFQ9HC10 1997 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 MROH5Q6ZUA9 1318 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 SNAP23O00161 211 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 SASH1O94885 1247 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 NBPF7P0C2Y1 421 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 KIF23Q02241 960 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 DLGAP5Q15398 846 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 ZNF594Q96JF6 807 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-203ENST00000554074 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 RIPOR2Q9Y4F9 1068 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
SLIRP-203ENST00000554074 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 CCER2I3L3R5 266 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 MYO1BO43795 1136 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 ANKRD44Q8N8A2 993 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 TDRD7Q8NHU6 1098 aaKnown RBP8.32□□□□□ -1.08
SLIRP-203ENST00000554074 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 BICC1Q9H694 974 aaKnown RBP8.32□□□□□ -1.08
SLIRP-203ENST00000554074 RNF186Q9NXI6 227 aa8.32□□□□□ -1.08
SLIRP-203ENST00000554074 KIF16BQ96L93 1317 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 AK9Q5TCS8 1911 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 HIBADHP31937 336 aaKnown RBP8.31□□□□□ -1.08
SLIRP-203ENST00000554074 MAP3K11Q16584 847 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
SLIRP-203ENST00000554074 LDLRAD1Q5T700 205 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
SLIRP-203ENST00000554074 ARMC9Q7Z3E5 817 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
SLIRP-203ENST00000554074 UBE2Q2LH0YL09 131 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 PLIN1O60240 522 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 TRPA1O75762 1119 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 PDE8BO95263 885 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 TM4SF4P48230 202 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 TTLL12Q14166 644 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-203ENST00000554074 CFAP100Q494V2 611 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 PRAMEF18Q5VWM3 479 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 MOB2Q70IA6 237 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 VGLL2Q8N8G2 317 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 TBC1D22AQ8WUA7 517 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 FAM84BQ96KN1 310 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-203ENST00000554074 CFHR5Q9BXR6 569 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 PUS3Q9BZE2 481 aaKnown RBP8.3□□□□□ -1.08
SLIRP-203ENST00000554074 MCOLN1Q9GZU1 580 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 DEFB129Q9H1M3 183 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 RNF39Q9H2S5 420 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 SERPINA10Q9UK55 444 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 FBXO3Q9UK99 471 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 SCAF8Q9UPN6 1271 aaKnown RBP8.3□□□□□ -1.08
SLIRP-203ENST00000554074 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
SLIRP-203ENST00000554074 PDE4DIPQ5VU43 2346 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-203ENST00000554074 GYG1P46976 350 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 RGS19P49795 217 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 HDLBPQ00341 1268 aaKnown RBP8.29□□□□□ -1.08
SLIRP-203ENST00000554074 CACNB1Q02641 598 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-203ENST00000554074 PTPN12Q05209 780 aaKnown RBP8.29□□□□□ -1.08
SLIRP-203ENST00000554074 SREBF2Q12772 1141 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 DGKZQ13574 1117 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 TNFAIP1Q13829 316 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 SUPT20HL1Q3ZLR7 823 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 CAVIN4Q5BKX8 364 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 METTL24Q5JXM2 366 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 PRMT6Q96LA8 375 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-203ENST00000554074 SMC4Q9NTJ3 1288 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 SUGT1Q9Y2Z0 365 aa8.29□□□□□ -1.08
SLIRP-203ENST00000554074 F8W031 263 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 ZBTB22O15209 634 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 ZBTB48P10074 688 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 KCNA4P22459 653 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 RFX5P48382 616 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 INHBEP58166 350 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 PUM3Q15397 648 aaKnown RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 SPDYE2Q495Y8 402 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 LRRC24Q50LG9 513 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 VPS37DQ86XT2 251 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 MRIQ9BWK5 157 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 API5Q9BZZ5 524 aaKnown RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
SLIRP-203ENST00000554074 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms