RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.46
LETMD1-234ENST00000552645 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 ZNF646O15015 1829 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-234ENST00000552645 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
LETMD1-234ENST00000552645 PHKA1P46020 1223 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 SCNN1DP51172 638 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 STRIP1Q5VSL9 837 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-234ENST00000552645 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 RHPN1Q8TCX5 695 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-234ENST00000552645 GNL3LQ9NVN8 582 aaKnown RBP12.2□□□□□ -0.46
LETMD1-234ENST00000552645 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
LETMD1-234ENST00000552645 POTECB2RU33 542 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 EPHX2P34913 555 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 DACT2Q5SW24 774 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 CCDC102BQ68D86 513 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 AACSQ86V21 672 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 H7C1D1 291 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 KIF3CO14782 793 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 SMARCA5O60264 1052 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 AAMPQ13685 434 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 GSE1Q14687 1217 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 KIAA0825Q8IV33 1275 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 EAF2Q96CJ1 260 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 DBNDD2Q9BQY9 259 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-234ENST00000552645 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
LETMD1-234ENST00000552645 IFIT2P09913 472 aaKnown RBP12.18□□□□□ -0.46
LETMD1-234ENST00000552645 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
LETMD1-234ENST00000552645 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
LETMD1-234ENST00000552645 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
LETMD1-234ENST00000552645 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
LETMD1-234ENST00000552645 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
LETMD1-234ENST00000552645 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
LETMD1-234ENST00000552645 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 CERS5Q8N5B7 392 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 DPF2Q92785 391 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 DCTPP1Q9H773 170 aa12.17□□□□□ -0.46
LETMD1-234ENST00000552645 DBNLQ9UJU6 430 aaKnown RBP12.17□□□□□ -0.46
LETMD1-234ENST00000552645 FAM205AQ6ZU69 1335 aa12.16□□□□□ -0.46
LETMD1-234ENST00000552645 MYO3BQ8WXR4 1341 aa12.16□□□□□ -0.46
LETMD1-234ENST00000552645 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
LETMD1-234ENST00000552645 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
LETMD1-234ENST00000552645 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
LETMD1-234ENST00000552645 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-234ENST00000552645 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
LETMD1-234ENST00000552645 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-234ENST00000552645 EGFRP00533 1210 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-234ENST00000552645 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-234ENST00000552645 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 GMLQ99445 158 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
LETMD1-234ENST00000552645 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
LETMD1-234ENST00000552645 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.47
LETMD1-234ENST00000552645 SCARF1Q14162 830 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 PI16Q6UXB8 463 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 ABCF2Q9UG63 623 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.47
LETMD1-234ENST00000552645 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.47
LETMD1-234ENST00000552645 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 SEMA3EO15041 775 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 TOMM70O94826 608 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 IGHDP01880 384 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 GRIK5Q16478 980 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 ANKRD45Q5TZF3 282 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-234ENST00000552645 SPATA5Q8NB90 893 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
LETMD1-234ENST00000552645 MYO5AQ9Y4I1 1855 aaKnown RBP12.13□□□□□ -0.47
LETMD1-234ENST00000552645 ARID4AP29374 1257 aaPredicted RBP12.13□□□□□ -0.47
LETMD1-234ENST00000552645 MCAMP43121 646 aa12.13□□□□□ -0.47
LETMD1-234ENST00000552645 FKBP1AP62942 108 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms