RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CAMKK2Q96RR4 588 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 DALRD3Q5D0E6 543 aaKnown RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 MASTLQ96GX5 879 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 RIPOR2Q9Y4F9 1068 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 ATRNO75882 1429 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 POLRMTO00411 1230 aaKnown RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 CEBPZQ03701 1054 aaKnown RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 CTDSPL2Q05D32 466 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 ZSCAN25Q6NSZ9 544 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 TGFBRAP1Q8WUH2 860 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 RGS12O14924 1447 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 PHRF1Q9P1Y6 1649 aaKnown RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 GPAA1O43292 621 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 NPR1P16066 1061 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 RFX5P48382 616 aaPredicted RBP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
CHPT1-208ENST00000552215 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 PIM2Q9P1W9 311 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 STX8Q9UNK0 236 aa9.73□□□□□ -0.85
CHPT1-208ENST00000552215 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 BSDC1Q9NW68 430 aaPredicted RBP9.72□□□□□ -0.85
CHPT1-208ENST00000552215 COL14A1Q05707 1796 aaKnown RBP9.72□□□□□ -0.85
CHPT1-208ENST00000552215 ERICH2A1L162 156 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 HIP1O00291 1037 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 PALD1Q9ULE6 856 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 TCP10L2B9ZVM9 353 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 IMMTQ16891 758 aaKnown RBP9.72□□□□□ -0.85
CHPT1-208ENST00000552215 SYNE3Q6ZMZ3 975 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 PUS7LQ9H0K6 701 aaKnown RBP9.72□□□□□ -0.85
CHPT1-208ENST00000552215 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 XDHP47989 1333 aa9.72□□□□□ -0.85
CHPT1-208ENST00000552215 BBOX1O75936 387 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 HMGB2P26583 209 aaKnown RBP9.71□□□□□ -0.85
CHPT1-208ENST00000552215 CASP7P55210 303 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 ZYXQ15942 572 aaKnown RBP9.71□□□□□ -0.85
CHPT1-208ENST00000552215 FERMT3Q86UX7 667 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 CCDC83Q8IWF9 413 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 NIM1KQ8IY84 436 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.85
CHPT1-208ENST00000552215 PDE6AP16499 860 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 PRAMEF18Q5VWM3 479 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.85
CHPT1-208ENST00000552215 EYA3Q99504 573 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.85
CHPT1-208ENST00000552215 ATP5JP18859 108 aa9.71□□□□□ -0.86
CHPT1-208ENST00000552215 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
CHPT1-208ENST00000552215 CSF1RP07333 972 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
CHPT1-208ENST00000552215 RABL6Q3YEC7 729 aaPredicted RBP9.7□□□□□ -0.86
CHPT1-208ENST00000552215 MICU3Q86XE3 530 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 PI4K2BQ8TCG2 481 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 IL25Q9H293 177 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 H3BQV1 296 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 IFFO2Q5TF58 517 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 MYL10Q9BUA6 226 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 DENND2AQ9ULE3 1009 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 BRF1Q92994 677 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 UBAC1Q9BSL1 405 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 RASSF7Q02833 373 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
CHPT1-208ENST00000552215 FHDC1Q9C0D6 1143 aaPredicted RBP9.7□□□□□ -0.86
CHPT1-208ENST00000552215 ATP10DQ9P241 1426 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 B4E1Z4 1266 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 M0R2C6 588 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 IFIT3O14879 490 aaKnown RBP9.69□□□□□ -0.86
CHPT1-208ENST00000552215 BAG3O95817 575 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 TBC1D16Q8TBP0 767 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 hCG_1642624A0A1W2PR95 340 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 USP17L21D6R901 530 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 SRGNP10124 158 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 MTX1Q13505 466 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 UBE4AQ14139 1066 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
CHPT1-208ENST00000552215 HAUS7Q99871 368 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 CD209Q9NNX6 404 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 SMC3Q9UQE7 1217 aa9.69□□□□□ -0.86
CHPT1-208ENST00000552215 U3KPZ7 1027 aaPredicted RBP9.69□□□□□ -0.86
CHPT1-208ENST00000552215 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
CHPT1-208ENST00000552215 USP40Q9NVE5 1235 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 CDHR2Q9BYE9 1310 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
CHPT1-208ENST00000552215 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 ZNF444Q8N0Y2 327 aaPredicted RBP9.68□□□□□ -0.86
CHPT1-208ENST00000552215 CMTR1Q8N1G2 835 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms