RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GOLM1Q8NBJ4 401 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 GPATCH3Q96I76 525 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 ZFP42Q96MM3 310 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 HHIPQ96QV1 700 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 PRKAG3Q9UGI9 489 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 ROBO2Q9HCK4 1378 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 A0A096LPE4 126 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 A0A1W2PPZ6 126 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 KHNYNO15037 678 aaKnown RBP5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 BNIP3LO60238 219 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 PAGE1O75459 146 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 NRLP54845 237 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 SPEM2Q0P670 501 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 APOBRQ0VD83 1088 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 TTBK2Q6IQ55 1244 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 CCDC84Q86UT8 332 aaPredicted RBP5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 TRIM42Q8IWZ5 723 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 SLC30A3Q99726 388 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 MSRB2Q9Y3D2 182 aa5.94□□□□□ -1.46
LSM6P2-201ENST00000552208 DCDC2BA2VCK2 349 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM221AA4D161 298 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM221BA6H8Z2 402 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 ZBTB42B2RXF5 422 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 AXIN1O15169 862 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 DHX32Q7L7V1 743 aaKnown RBP5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 TRPM4Q8TD43 1214 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 HNRNPLLQ8WVV9 542 aaKnown RBP5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 NKD1Q969G9 470 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 SRRTQ9BXP5 876 aaKnown RBP5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 SNTG2Q9NY99 539 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 MARK1Q9P0L2 795 aa5.93□□□□□ -1.46
LSM6P2-201ENST00000552208 SLC35F4A4IF30 521 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM181BA6NEQ2 426 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 F13A1P00488 732 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 BMP6P22004 513 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 GIPRP48546 466 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 DBN1Q16643 649 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 SNAP47Q5SQN1 464 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 RASIP1Q5U651 963 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 BNC2Q6ZN30 1099 aaPredicted RBP5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM169BQ8N8A8 192 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 FBXO27Q8NI29 283 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 SRPK1Q96SB4 655 aaKnown RBP5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 PPT2Q9UMR5 302 aa5.92□□□□□ -1.46
LSM6P2-201ENST00000552208 LOC102724428A0A0B4J2F2 783 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 PDE2AO00408 941 aaPredicted RBP5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 SIK1P57059 783 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 GPLD1P80108 840 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 SEZ6Q53EL9 994 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 PLEKHG4Q58EX7 1191 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM182BQ5T319 152 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 KANK3Q6NY19 840 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 KCNB2Q92953 911 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 PLD4Q96BZ4 506 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 ANAPC16Q96DE5 110 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 NSUN5Q96P11 429 aaKnown RBP5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 PBX4Q9BYU1 374 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 BRINP2Q9C0B6 783 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 CCDC113Q9H0I3 377 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 NUCKS1Q9H1E3 243 aaKnown RBP5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 PCDHB5Q9Y5E4 795 aa5.91□□□□□ -1.46
LSM6P2-201ENST00000552208 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 CILPO75339 1184 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 TNNI3KQ59H18 835 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 RIPOR1Q6ZS17 1223 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 TRIM22Q8IYM9 498 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 REXO1Q8N1G1 1221 aaKnown RBP5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 CELF2-AS1Q8N7Q2 184 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 CPLX3Q8WVH0 158 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 BHMTQ93088 406 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 POP1Q99575 1024 aaKnown RBP5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 MUC3BQ9H195 1237 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 RASSF4Q9H2L5 321 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 AAASQ9NRG9 546 aa5.9□□□□□ -1.46
LSM6P2-201ENST00000552208 H7C1W4 665 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 U2SURPO15042 1029 aaKnown RBP5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 CD33P20138 364 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 ATP11AP98196 1134 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 PTSQ03393 145 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 MPP2Q14168 576 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 PTPROQ16827 1216 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 CCDC81Q6ZN84 652 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 RAB44Q7Z6P3 723 aaPredicted RBP5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 LILRB2Q8N423 598 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 RBBP8NLQ8NC74 664 aaPredicted RBP5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 KIFC2Q96AC6 838 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 ABHD17AQ96GS6 310 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 SENP2Q9HC62 589 aa5.89□□□□□ -1.47
LSM6P2-201ENST00000552208 J3QW42 95 aa5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 TLR3O15455 904 aaKnown RBP5.88□□□□□ -1.47
LSM6P2-201ENST00000552208 ST8SIA5O15466 376 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms