RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IGKV5-2P06315 115 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 MAP2K2P36507 400 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 NBPF9Q3BBW0 867 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 ZBTB38Q8NAP3 1195 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 DCPSQ96C86 337 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 VPS33BQ9H267 617 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 BABAM1Q9NWV8 329 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 RNF186Q9NXI6 227 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 JAG2Q9Y219 1238 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 PI4KAP2A4QPH2 592 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 VIL1P09327 827 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 RGMBQ6NW40 437 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 PI4KAP1Q8N8J0 262 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 DPF2Q92785 391 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 GREM2Q9H772 168 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 PRKRIP1Q9H875 184 aaPredicted RBP8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 SPEF2Q9C093 1822 aa8.84□□□□□ -0.99
PRPF40B-214ENST00000551320 EVI5O60447 810 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 PDE8AO60658 829 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 SASH1O94885 1247 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 TBC1D8O95759 1140 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 RSBN1LQ6PCB5 846 aaPredicted RBP8.83□□□□□ -1
PRPF40B-214ENST00000551320 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 HELBQ8NG08 1087 aaPredicted RBP8.83□□□□□ -1
PRPF40B-214ENST00000551320 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
PRPF40B-214ENST00000551320 R3HDMLQ9H3Y0 253 aa8.83□□□□□ -1
PRPF40B-214ENST00000551320 CWC25Q9NXE8 425 aaPredicted RBP8.83□□□□□ -1
PRPF40B-214ENST00000551320 AOX1Q06278 1338 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 PCCAP05165 728 aaPredicted RBP8.82□□□□□ -1
PRPF40B-214ENST00000551320 CTSWP56202 376 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 MLLT1Q03111 559 aaPredicted RBP8.82□□□□□ -1
PRPF40B-214ENST00000551320 NOGQ13253 232 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 TRIM28Q13263 835 aaKnown RBP8.82□□□□□ -1
PRPF40B-214ENST00000551320 CCDC152Q4G0S7 254 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 UBE3BQ7Z3V4 1068 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 RASAL3Q86YV0 1011 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 ANKRD18AQ8IVF6 992 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 SULF1Q8IWU6 871 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 TTLL11Q8NHH1 800 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 GMLQ99445 158 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 EYA3Q99504 573 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 MYOZ2Q9NPC6 264 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 IFT57Q9NWB7 429 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 PCDHGA4Q9Y5G9 962 aa8.82□□□□□ -1
PRPF40B-214ENST00000551320 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 TAF5LO75529 589 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 USP17L8P0C7I0 530 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 ZNF280AP59817 542 aaPredicted RBP8.81□□□□□ -1
PRPF40B-214ENST00000551320 GNAI1P63096 354 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
PRPF40B-214ENST00000551320 TMC4Q7Z404 712 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 CCDC191Q8NCU4 936 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
PRPF40B-214ENST00000551320 CDHR2Q9BYE9 1310 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 USP17L3A6NCW0 530 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 USP17L4A6NCW7 530 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 ZNF316A6NFI3 1004 aaPredicted RBP8.8□□□□□ -1
PRPF40B-214ENST00000551320 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 F6X3S4 739 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 F8W031 263 aaPredicted RBP8.8□□□□□ -1
PRPF40B-214ENST00000551320 SLC10A3P09131 477 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 HOXB7P09629 217 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 HOXB3P14651 431 aaPredicted RBP8.8□□□□□ -1
PRPF40B-214ENST00000551320 RPS12P25398 132 aaKnown RBP8.8□□□□□ -1
PRPF40B-214ENST00000551320 DACT2Q5SW24 774 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 DDX12PQ92771 950 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 HHIPL1Q96JK4 782 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 XDHP47989 1333 aa8.8□□□□□ -1
PRPF40B-214ENST00000551320 HTTP42858 3142 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 PLIN1O60240 522 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
PRPF40B-214ENST00000551320 GTF2IP78347 998 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 PTPN12Q05209 780 aaKnown RBP8.79□□□□□ -1
PRPF40B-214ENST00000551320 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 CCDC30Q5VVM6 783 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 KSR2Q6VAB6 950 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 OTUD5Q96G74 571 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 ZNF594Q96JF6 807 aaPredicted RBP8.79□□□□□ -1
PRPF40B-214ENST00000551320 CENPFP49454 3210 aa8.79□□□□□ -1
PRPF40B-214ENST00000551320 CLRN2A0PK11 232 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 WNT10BO00744 389 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 ITGA6P23229 1130 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 ATP2B4P23634 1241 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 RGS19P49795 217 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
PRPF40B-214ENST00000551320 CERS5Q8N5B7 392 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 CCDC102AQ96A19 550 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 CLMNQ96JQ2 1002 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
PRPF40B-214ENST00000551320 MKI67P46013 3256 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms