RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 IL1RAPL2Q9NP60 686 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 GPRC5DQ9NZD1 345 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 CNOT7Q9UIV1 285 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 JAG2Q9Y219 1238 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-209ENST00000550872 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-209ENST00000550872 EAF2Q96CJ1 260 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-209ENST00000550872 CCDC8Q9H0W5 538 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-209ENST00000550872 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
CHMP1A-209ENST00000550872 H7C1D1 291 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 EPHX2P34913 555 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 AACSQ86V21 672 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 MICALL2Q8IY33 904 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 C16orf71Q8IYS4 520 aaPredicted RBP19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 CLASRPQ8N2M8 674 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 DBNDD2Q9BQY9 259 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 TAF1DQ9H5J8 278 aaPredicted RBP19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 PSME4Q14997 1843 aa19.95■□□□□ 0.78
CHMP1A-209ENST00000550872 HDAC1Q13547 482 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 GMLQ99445 158 aa19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 LRRCC1Q9C099 1032 aa19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 RWDD1Q9H446 243 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 SCN4AP35499 1836 aa19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 MYO3BQ8WXR4 1341 aa19.94■□□□□ 0.78
CHMP1A-209ENST00000550872 SHTN1A0MZ66 631 aa19.93■□□□□ 0.78
CHMP1A-209ENST00000550872 CCDC158Q5M9N0 1113 aa19.93■□□□□ 0.78
CHMP1A-209ENST00000550872 SEMA3EO15041 775 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 FKBP1AP62942 108 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 FSTL1Q12841 308 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 EAPPQ56P03 285 aaPredicted RBP19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 MFSD14BQ5SR56 506 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 KIAA0825Q8IV33 1275 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 CERS5Q8N5B7 392 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 ADARB2Q9NS39 739 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 TLR7Q9NYK1 1049 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 DENND2AQ9ULE3 1009 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 ARAP2Q8WZ64 1704 aa19.92■□□□□ 0.78
CHMP1A-209ENST00000550872 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 IFIT2P09913 472 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 UQCRFS1P1P0C7P4 283 aa19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 TTC39AQ5SRH9 613 aa19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 RBM26Q5T8P6 1007 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 PNMA8AQ86V59 439 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 OGFOD1Q8N543 542 aa19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 DNAJC5GQ8N7S2 189 aa19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 TBC1D22AQ8WUA7 517 aa19.91■□□□□ 0.78
CHMP1A-209ENST00000550872 RASGRF1Q13972 1273 aa19.9■□□□□ 0.78
CHMP1A-209ENST00000550872 SAMD7Q7Z3H4 446 aa19.9■□□□□ 0.78
CHMP1A-209ENST00000550872 WDR66Q8TBY9 1149 aa19.9■□□□□ 0.78
CHMP1A-209ENST00000550872 HDAC9Q9UKV0 1011 aa19.9■□□□□ 0.78
CHMP1A-209ENST00000550872 F8W031 263 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 ARID4AP29374 1257 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 ZNF280AP59817 542 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 TBC1D10BQ4KMP7 808 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 USP50Q70EL3 339 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 GCC1Q96CN9 775 aa19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 CLEC11AQ9Y240 323 aa19.89■□□□□ 0.77
CHMP1A-209ENST00000550872 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 ZBTB22O15209 634 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 IGHDP01880 384 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 NEFLP07196 543 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 TRPM4Q8TD43 1214 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 HMG20BQ9P0W2 317 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 MYH13Q9UKX3 1938 aa19.88■□□□□ 0.77
CHMP1A-209ENST00000550872 COL1A1P02452 1464 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 POTEIP0CG38 1075 aa19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 POTEJP0CG39 1038 aa19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 MMP14P50281 582 aa19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 SPATA5Q8NB90 893 aa19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 ZNF512BQ96KM6 892 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-209ENST00000550872 MCAMP43121 646 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 HIRAP54198 1017 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 SCARF1Q14162 830 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 GRIK5Q16478 980 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 KIF4BQ2VIQ3 1234 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 LDHDQ86WU2 507 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 MYOZ2Q9NPC6 264 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 TTF2Q9UNY4 1162 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-209ENST00000550872 PDS5AQ29RF7 1337 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 EGFRP00533 1210 aa19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 PI16Q6UXB8 463 aa19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 ZGPATQ8N5A5 531 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 ABCF2Q9UG63 623 aa19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 SUGT1Q9Y2Z0 365 aa19.85■□□□□ 0.77
CHMP1A-209ENST00000550872 SALL1Q9NSC2 1324 aa19.84■□□□□ 0.77
CHMP1A-209ENST00000550872 SMC5Q8IY18 1101 aa19.84■□□□□ 0.77
CHMP1A-209ENST00000550872 SMC1BQ8NDV3 1235 aa19.84■□□□□ 0.77
CHMP1A-209ENST00000550872 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.77
CHMP1A-209ENST00000550872 RBM5P52756 815 aaKnown RBP eCLIP19.83■□□□□ 0.77
CHMP1A-209ENST00000550872 DLGAP5Q15398 846 aa19.83■□□□□ 0.77
CHMP1A-209ENST00000550872 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.77
CHMP1A-209ENST00000550872 CHADLQ6NUI6 762 aa19.83■□□□□ 0.77
CHMP1A-209ENST00000550872 MAST3O60307 1309 aa19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 PRDX5P30044 214 aa19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 ZAP70P43403 619 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms