RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
PRPF40B-209ENST00000548825 ZNF396Q96N95 335 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-209ENST00000548825 HELLSQ9NRZ9 838 aa15.96■□□□□ 0.15
PRPF40B-209ENST00000548825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRPF40B-209ENST00000548825 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
PRPF40B-209ENST00000548825 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 MINDY4BA8MYZ0 360 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 PFKFB2O60825 505 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 MCM5P33992 734 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 FUCA2Q9BTY2 467 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 AKAP2Q9Y2D5 859 aa15.96■□□□□ 0.14
PRPF40B-209ENST00000548825 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 KCNB2Q92953 911 aa15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 MCAMP43121 646 aa15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 CBX1P83916 185 aa15.95■□□□□ 0.14
PRPF40B-209ENST00000548825 IGSF3O75054 1194 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 PDILTQ8N807 584 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 ZSCAN16Q9H4T2 348 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 SEC31BQ9NQW1 1179 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 NAA30Q147X3 362 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 NCOA7Q8NI08 942 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 CTNNA3Q9UI47 895 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 LRRC37A3O60309 1634 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 NDUFA8P51970 172 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 FAM177A1Q8N128 213 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 MAGEB6Q8N7X4 407 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 TMX1Q9H3N1 280 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 ARMT1Q9H993 441 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 PCDHA7Q9UN72 937 aa15.94■□□□□ 0.14
PRPF40B-209ENST00000548825 ZNF532Q9HCE3 1301 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 RIOK3O14730 519 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 TDO2P48775 406 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 CCDC144BQ3MJ40 725 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 DZIP3Q86Y13 1208 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 NKX2-3Q8TAU0 364 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 SLC26A6Q9BXS9 759 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
PRPF40B-209ENST00000548825 PRKAB2O43741 272 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 TNNT1P13805 278 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 ZNF75DP51815 510 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 NAPBQ9H115 298 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 PDCL3Q9H2J4 239 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 PIH1D3Q9NQM4 214 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 LRP2BPQ9P2M1 347 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 CACTINQ8WUQ7 758 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 UBE2Q2Q8WVN8 375 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 IL17RAQ96F46 866 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 CLIC6Q96NY7 704 aa15.92■□□□□ 0.14
PRPF40B-209ENST00000548825 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 FDPSP14324 419 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 TMEM67Q5HYA8 995 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 MBD4O95243 580 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 TRIM29Q14134 588 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 APPBP2Q92624 585 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 PRDM1O75626 825 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 CEP57L1Q8IYX8 460 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 MRPS27Q92552 414 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
PRPF40B-209ENST00000548825 WTIPA6NIX2 430 aaPredicted RBP15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 SPTLC2O15270 562 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 KIAA1524Q8TCG1 905 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 ZMYND15Q9H091 742 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 BCAMP50895 628 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 GOLGA8FQ08AF8 430 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 GOLGA8DPQ0D2H9 430 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 STX1AQ16623 288 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 DPCR1Q3MIW9 517 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 CCDC102BQ68D86 513 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 TBC1D10CQ8IV04 446 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 KCNJ14Q9UNX9 436 aa15.9■□□□□ 0.14
PRPF40B-209ENST00000548825 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 EXOC5O00471 708 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 SKILP12757 684 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 ZSCAN25Q6NSZ9 544 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 CYB5R4Q7L1T6 521 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 ELP1O95163 1332 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 TSGA10IPQ3SY00 556 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms